Pairwise Alignments

Query, 291 a.a., putative efflux pump from Pseudomonas putida KT2440

Subject, 332 a.a., Tetrapartite efflux system, membrane fusion component FusE-like from Variovorax sp. SCN45

 Score =  259 bits (661), Expect = 7e-74
 Identities = 138/291 (47%), Positives = 195/291 (67%), Gaps = 15/291 (5%)

Query: 10  RVVLTLLVVTFAAVLVWQMVVYYMFAPWTRDGHIRADVIQIAPDVSGLIQKVEVRDNQTV 69
           R++ TL +V  +    WQ+  +Y  APWTR+G +RADV+Q+APDVSGL+  V VRDNQ+V
Sbjct: 21  RLLFTLTIVAASCWAAWQLWDHYELAPWTRNGRVRADVVQVAPDVSGLVSDVAVRDNQSV 80

Query: 70  KRGDVLFTIDQDRFTLALRQAK-------ATLGERQETLAQASREAQRNRKLGNLVAAEQ 122
             G +LF +D+ RF LA +QA+       A++G ++  +AQA RE  RN  LG+LV+ E 
Sbjct: 81  AAGALLFAVDRARFELAEQQAEAAVAAQAASVGNQRILIAQAHRENNRNSGLGDLVSQEV 140

Query: 123 LEESQSREARARS-------AVSEAQVAVDTAQLNLDRSVVRSPVDGYLNDRAPRNHEFV 175
            E+S+ R  +A S       A+ +AQVA+DTA+LNL R+ VR+P  G + +   R   + 
Sbjct: 141 REQSRLRLDQANSALRSAEAALRQAQVALDTARLNLRRTEVRAPTAGLVTNLDLRQGAYA 200

Query: 176 TAGRPVLSVVDSASYHVDGYFEETKLGGIHIGDAVDIRVMGDNTRLRGHVQSFAAGIEDR 235
           +AG PV+++VD+ S +V+GYFEE KL  IH+GD V +  M D   + G V+S AAGI DR
Sbjct: 201 SAGHPVMALVDADSVYVEGYFEENKLARIHLGDRVRVTPM-DADAIEGAVESIAAGIADR 259

Query: 236 DRSSGANLLPNVNPAFSWVRLAQRIPVRIAFDEVPQDFRMIAGRTATVSII 286
           DRS GANLLP+VNP F+WVRLAQR+PVR+    +P   R++ G+T TV ++
Sbjct: 260 DRSIGANLLPSVNPTFNWVRLAQRVPVRVKLGAIPAGTRLVTGQTVTVQVL 310