Pairwise Alignments

Query, 291 a.a., putative efflux pump from Pseudomonas putida KT2440

Subject, 286 a.a., Secretion protein HlyD from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  214 bits (546), Expect = 1e-60
 Identities = 116/273 (42%), Positives = 166/273 (60%), Gaps = 2/273 (0%)

Query: 14  TLLVVTFAAVLVWQMVVYYMFAPWTRDGHIRADVIQIAPDVSGLIQKVEVRDNQTVKRGD 73
           TLLV+  A  +   + V YM  PWTRDG +RAD+I +A DVSG +  V V DNQ VKRGD
Sbjct: 10  TLLVLAIALWIGRALWVDYMDTPWTRDGRVRADIINVAADVSGTVVDVPVHDNQWVKRGD 69

Query: 74  VLFTIDQDRFTLALRQAKATLGERQETLAQASREAQRNRKLGNLV-AAEQLEESQSREAR 132
           +L  ID + + +A++QA+A L  R+ T       A+R   +  LV +AE  +++ +    
Sbjct: 70  LLMQIDPEHYRIAVKQAQALLASRKATWEMRKLNARRRADMDELVISAENRDDASNVATS 129

Query: 133 ARSAVSEAQVAVDTAQLNLDRSVVRSPVDGYLNDRAPRNHEFVTAGRPVLSVVDSASYHV 192
           A +    AQ  ++ A+LNL R+ V + VDGY+ +      ++   G   ++VVD  S+ V
Sbjct: 130 ALADYQLAQAQLEAAELNLSRTRVLAAVDGYVTNLNVHRGDYARIGEAKMAVVDMNSFWV 189

Query: 193 DGYFEETKLGGIHIGDAVDIRVMGDNTRLRGHVQSFAAGIEDRDRSSGANLLPNVNPAFS 252
            G+FEETKL  + +GD  D+++M     L+GHV+S A GI DRD      L+ +VNP F+
Sbjct: 190 YGFFEETKLPHLKVGDPADLQLMSGEV-LKGHVESIARGIYDRDNPQSRELIADVNPTFN 248

Query: 253 WVRLAQRIPVRIAFDEVPQDFRMIAGRTATVSI 285
           WVRLAQR+PVRI  D+VPQD  + AG T TV +
Sbjct: 249 WVRLAQRVPVRIHLDQVPQDVLLAAGMTCTVIV 281