Pairwise Alignments

Query, 291 a.a., putative efflux pump from Pseudomonas putida KT2440

Subject, 295 a.a., HlyD family secretion protein from Rhizobium sp. OAE497

 Score =  275 bits (703), Expect = 9e-79
 Identities = 139/281 (49%), Positives = 195/281 (69%)

Query: 5   LLTLGRVVLTLLVVTFAAVLVWQMVVYYMFAPWTRDGHIRADVIQIAPDVSGLIQKVEVR 64
           L ++ R+++TL  V  AA     + V+YM  PWTRD  +RADV+ IAPDVSGL+  V V+
Sbjct: 4   LKSISRLIVTLAFVAAAAYAGHGLWVHYMDEPWTRDARLRADVVGIAPDVSGLVSDVAVK 63

Query: 65  DNQTVKRGDVLFTIDQDRFTLALRQAKATLGERQETLAQASREAQRNRKLGNLVAAEQLE 124
           DNQ+VK+GDVLF +D +RF +AL Q +A L   +  L QA RE +R  +LG+  + +Q E
Sbjct: 64  DNQSVKKGDVLFRVDGERFKIALAQTEAALEGAKAALEQARRETERQERLGDAASMQQKE 123

Query: 125 ESQSREARARSAVSEAQVAVDTAQLNLDRSVVRSPVDGYLNDRAPRNHEFVTAGRPVLSV 184
           ++++   +A +   +A    D AQLNLDRS V++ V+G +++ + R  ++VTAG   +++
Sbjct: 124 QARTAADQAEATYLQAVANRDLAQLNLDRSAVKATVNGTVSNLSLRPGDYVTAGTAKVAL 183

Query: 185 VDSASYHVDGYFEETKLGGIHIGDAVDIRVMGDNTRLRGHVQSFAAGIEDRDRSSGANLL 244
           VD+ S  V+GYFEETKL  IH+GD+V I +MG    L GHV S A GIEDR+R+SG  LL
Sbjct: 184 VDTDSLRVEGYFEETKLPRIHVGDSVTIHLMGHRQTLEGHVDSIATGIEDRERTSGTGLL 243

Query: 245 PNVNPAFSWVRLAQRIPVRIAFDEVPQDFRMIAGRTATVSI 285
            N+NP FSWVRLAQR+PVRI  D+VP+D ++IAG TATV +
Sbjct: 244 ANINPTFSWVRLAQRVPVRINLDKVPEDIKLIAGLTATVEV 284