Pairwise Alignments

Query, 291 a.a., putative efflux pump from Pseudomonas putida KT2440

Subject, 289 a.a., putative membrane fusion efflux protein from Pseudomonas putida KT2440

 Score =  243 bits (621), Expect = 3e-69
 Identities = 124/283 (43%), Positives = 180/283 (63%), Gaps = 1/283 (0%)

Query: 10  RVVLTLLVVTFAAVLVWQMVVYYMFAPWTRDGHIRADVIQIAPDVSGLIQKVEVRDNQTV 69
           R+++TL VV  A +  +Q+  YYM  PWTRD  +RADV+ IAPDVSG +++++V DNQ V
Sbjct: 6   RILVTLCVVALAVLAGYQLWQYYMLTPWTRDARVRADVVVIAPDVSGWVRELKVHDNQQV 65

Query: 70  KRGDVLFTIDQDRFTLALRQAKATLGERQETLAQASREAQRNRKLG-NLVAAEQLEESQS 128
           K GD+L +ID++RF  AL QA A    R + L    REA R   LG   ++AE  E +Q 
Sbjct: 66  KAGDLLMSIDRERFQAALDQASAVTETRAQQLRLREREAARRTALGPEAISAELRENAQI 125

Query: 129 REARARSAVSEAQVAVDTAQLNLDRSVVRSPVDGYLNDRAPRNHEFVTAGRPVLSVVDSA 188
             A AR  + EA+  +  A++NL RS VR+P  G++ +       +V  G  V+++VD +
Sbjct: 126 NAAIARGELHEAEAQLQVARINLARSEVRAPRSGHITNLRLAEGNYVNTGESVMALVDDS 185

Query: 189 SYHVDGYFEETKLGGIHIGDAVDIRVMGDNTRLRGHVQSFAAGIEDRDRSSGANLLPNVN 248
           ++++  YFEETKL  I +GD V + +MG    ++GHV+S + GI DR+ +  + LLP V 
Sbjct: 186 TFYIQAYFEETKLPRIRVGDTVKVWLMGTGEPMQGHVESISRGITDRNSNPDSQLLPEVE 245

Query: 249 PAFSWVRLAQRIPVRIAFDEVPQDFRMIAGRTATVSIIEGQRP 291
           P F+WVRLAQRIPVRI  D+VP+   + AG TA+V + E + P
Sbjct: 246 PTFNWVRLAQRIPVRIRLDQVPEGLTLSAGMTASVQVHEDREP 288