Pairwise Alignments

Query, 291 a.a., putative efflux pump from Pseudomonas putida KT2440

Subject, 296 a.a., efflux RND transporter periplasmic adaptor subunit from Pseudomonas fluorescens SBW25

 Score =  471 bits (1211), Expect = e-137
 Identities = 233/286 (81%), Positives = 262/286 (91%)

Query: 1   MKKPLLTLGRVVLTLLVVTFAAVLVWQMVVYYMFAPWTRDGHIRADVIQIAPDVSGLIQK 60
           MKKP LT+GRVVLTLL+VTFA V+VW+MV+YYMFAPWTRDGHIRAD++QIAPDVSGLIQ+
Sbjct: 1   MKKPFLTIGRVVLTLLIVTFAVVVVWRMVMYYMFAPWTRDGHIRADIVQIAPDVSGLIQR 60

Query: 61  VEVRDNQTVKRGDVLFTIDQDRFTLALRQAKATLGERQETLAQASREAQRNRKLGNLVAA 120
           V+VRDNQ V +G VLF +DQDRF LALRQA+A + +RQETLAQA RE +RNR LGNLV +
Sbjct: 61  VDVRDNQLVTKGQVLFAVDQDRFKLALRQAQAAVADRQETLAQAQREYKRNRGLGNLVPS 120

Query: 121 EQLEESQSREARARSAVSEAQVAVDTAQLNLDRSVVRSPVDGYLNDRAPRNHEFVTAGRP 180
           EQLEESQSR ARA+SA++EAQV VD+AQLNLDRSV+RSPVDGY+NDRAPR  EFVTAGRP
Sbjct: 121 EQLEESQSRVARAQSALAEAQVTVDSAQLNLDRSVIRSPVDGYVNDRAPRAQEFVTAGRP 180

Query: 181 VLSVVDSASYHVDGYFEETKLGGIHIGDAVDIRVMGDNTRLRGHVQSFAAGIEDRDRSSG 240
           VLSVVDS S+H+DGYFEETKL GIH+G +VDIRV+GDN RLRGHVQS  AGIEDRDRSSG
Sbjct: 181 VLSVVDSNSFHIDGYFEETKLDGIHVGMSVDIRVIGDNARLRGHVQSIVAGIEDRDRSSG 240

Query: 241 ANLLPNVNPAFSWVRLAQRIPVRIAFDEVPQDFRMIAGRTATVSII 286
           +NLLPNVNPAFSWVRLAQRIPVRIAFD+VP DFRMIAGRTATVSII
Sbjct: 241 SNLLPNVNPAFSWVRLAQRIPVRIAFDDVPADFRMIAGRTATVSII 286