Pairwise Alignments

Query, 291 a.a., putative efflux pump from Pseudomonas putida KT2440

Subject, 294 a.a., p-hydroxybenzoic acid efflux pump subunit AaeA from Methylophilus sp. DMC18

 Score =  228 bits (582), Expect = 9e-65
 Identities = 125/277 (45%), Positives = 172/277 (62%), Gaps = 1/277 (0%)

Query: 10  RVVLTLLVVTFAAVLVWQMVVYYMFAPWTRDGHIRADVIQIAPDVSGLIQKVEVRDNQTV 69
           R  +TL +   A  L + + V Y   PWTRDG +RADV+ IAPDV+GL+  V V DNQ V
Sbjct: 16  RAGITLGIAVAAGWLAYTLWVRYTDYPWTRDGRVRADVVNIAPDVAGLVTAVPVHDNQYV 75

Query: 70  KRGDVLFTIDQDRFTLALRQAKATLGERQETLAQASREAQRNRKLGNLVAAEQLEESQSR 129
            +GDVLF ID   +  AL +AKA   +R+       ++AQR   L + V + +  E    
Sbjct: 76  HQGDVLFRIDPLHYAHALAEAKAVAQQRKSLWEMKQQQAQRRAHLDDEVISRENREDTDL 135

Query: 130 EARARSAVSEAQVA-VDTAQLNLDRSVVRSPVDGYLNDRAPRNHEFVTAGRPVLSVVDSA 188
            A A  A  EA +A V+  +L+L+R+VVRSPVDG++++   R  +F   G   L+V+D  
Sbjct: 136 GALAAKADYEAALAQVEKIKLDLERTVVRSPVDGWVSNLLVRPGDFAQVGAAKLAVIDQH 195

Query: 189 SYHVDGYFEETKLGGIHIGDAVDIRVMGDNTRLRGHVQSFAAGIEDRDRSSGANLLPNVN 248
           S+ V GYFEE K+  I  GDA D++++G +T L+GHV+S A GI DRD  +   LL NVN
Sbjct: 196 SFWVYGYFEEHKVSMIKPGDAADVQLLGSHTTLKGHVESIAHGITDRDNPTDVRLLANVN 255

Query: 249 PAFSWVRLAQRIPVRIAFDEVPQDFRMIAGRTATVSI 285
           P F+WVRLAQRIPVRI  D++P    ++AG T +V I
Sbjct: 256 PTFNWVRLAQRIPVRIRLDQIPAGLTLVAGMTCSVVI 292