Pairwise Alignments

Query, 291 a.a., putative efflux pump from Pseudomonas putida KT2440

Subject, 256 a.a., Uncharacterized protein YdhJ from Escherichia coli ECRC62

 Score =  204 bits (519), Expect = 2e-57
 Identities = 104/254 (40%), Positives = 158/254 (62%), Gaps = 1/254 (0%)

Query: 33  MFAPWTRDGHIRADVIQIAPDVSGLIQKVEVRDNQTVKRGDVLFTIDQDRFTLALRQAKA 92
           M +PWTRDG IRA+ + I P VSG I ++ ++DNQ V  GD+L TID+  F +A   A+A
Sbjct: 1   MQSPWTRDGKIRAEKVSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQA 60

Query: 93  TLGERQETLAQASREAQRNRKLG-NLVAAEQLEESQSREARARSAVSEAQVAVDTAQLNL 151
            L + Q  LA+A+ EA R R L  N ++AE+L+ +       +++V+ AQ  +   Q  L
Sbjct: 61  QLAKAQSDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVNAAQATLKQTQWQL 120

Query: 152 DRSVVRSPVDGYLNDRAPRNHEFVTAGRPVLSVVDSASYHVDGYFEETKLGGIHIGDAVD 211
            ++ +R+PV G++ +   R  ++   G+P+ ++VDS S++V GYFEETKL  I  G    
Sbjct: 121 AQTEIRAPVSGWVTNLTTRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQ 180

Query: 212 IRVMGDNTRLRGHVQSFAAGIEDRDRSSGANLLPNVNPAFSWVRLAQRIPVRIAFDEVPQ 271
           I +  DN  LRGHV S    I D+   S ++L+P+V P   WVRLAQR+PVR A D+VP 
Sbjct: 181 ITLYSDNKTLRGHVSSIGRAIYDQSVESDSSLIPDVKPNVPWVRLAQRVPVRFALDKVPG 240

Query: 272 DFRMIAGRTATVSI 285
           D  +++G T ++++
Sbjct: 241 DVTLVSGTTCSIAV 254