Pairwise Alignments

Query, 695 a.a., putative efflux transporter from Pseudomonas putida KT2440

Subject, 710 a.a., Tetrapartite efflux system, inner membrane component FusBC-like from Variovorax sp. SCN45

 Score =  295 bits (754), Expect = 7e-84
 Identities = 226/705 (32%), Positives = 336/705 (47%), Gaps = 46/705 (6%)

Query: 19  RTFGASMIALYIALLMQLPRPYWAMATVYIVSSPFVGPTSSKALYRAVGTLLGAGGAIFL 78
           ++F A+M+A+Y+A    LPRP+WA+ T Y+V+ P  G   SKA+YR  GTL+G+   + L
Sbjct: 19  KSFVAAMLAMYLASRAGLPRPFWALMTTYVVAHPLAGAVRSKAVYRFCGTLIGSTATVLL 78

Query: 79  VPPLVQSPLLLSIAVALWTGTLLFLSLNLRTANNYVLMLAGYTLPMIALAVVDNPLAVFD 138
           VP L  +P LL++ +ALW G  L +SL  RT  +YV MLAGYT  +I    V  PLA+FD
Sbjct: 79  VPALSNAPELLTLVLALWVGLCLCISLFDRTPRSYVFMLAGYTAALIGFPSVQTPLALFD 138

Query: 139 VASSRAQEICLGIVCAAVVGAIFWPRRLAPVVVGATGNWFNEAIRYSDTYL--------- 189
            A +R +EI LGI CA ++ ++  P  LAP V+G       +A ++    L         
Sbjct: 139 TAVARVEEIGLGIFCATLIHSLVLPAGLAPTVLGLLDRTLLDARKWLGDLLQPAAHGGGN 198

Query: 190 -ARDASADKVGGMRGAMVTTFNSLELMIGQLAHEGAGPHTLKNA-RELRGRMIHLLPVID 247
            A      ++   R  +      L L+   +  +         A R ++ R+  L P + 
Sbjct: 199 GANGGEPKRLDDDRRRLAGDITQLRLLSTHVPFDTTHLRWTAGAIRAMQDRVAALTPALS 258

Query: 248 ALDDALVAL---EGR-APAQFAQLQPVLEAAREWLKGTADSASVA-HWATLHEQIGRLQP 302
           A++D L AL   EGR AP   A L    +  RE  +  AD+A+ A    TL   I  L  
Sbjct: 259 AVEDRLQALAQAEGRLAPDVTAVLAQAAQWLREEAEPGADAATRAERLQTLRRAIDALS- 317

Query: 303 ATAALDQRAELLLSNALY-----RLTEWADLWQDCCTLQHALRTDDAKPWRAVYRHWRLG 357
           AT A  Q        AL      RL E  D W  C  L+  +  +  K    + R   LG
Sbjct: 318 ATPANAQPQHTAWGRALRIGLAGRLEELVDGWTACAQLRQDI-DEGLKGAAPLRRTAALG 376

Query: 358 RLTAFFDRGLMLYSVASTVLAIVVACGLWIGLGWNDGASAVILAAVACSFFAAMDDPAPQ 417
                 D G+ L S  + V+AI +    WI  GW  G++A ++AAV C FFA MDDP P 
Sbjct: 377 SRVLHRDYGMALLSALAAVIAICLCGAFWILTGWPMGSAATMMAAVFCCFFATMDDPVPA 436

Query: 418 IYRFFFWTLMSVIFSSLYLFLVLPNLHDFPMLVLAFAVPFICIGTLTVQPRFYLGTLLTI 477
           I+ F  WTL S+  S+LY+ +++P + DF MLVL  A   + +G    +P  ++  +  I
Sbjct: 437 IHGFLKWTLWSIPISALYVLVLMPMVQDFGMLVLICAPLLLLLGLYLPRPTHFMAAMALI 496

Query: 478 VNTSTFISIQGAYDADFFTFLNSNLAGPAGLLFAFIWTLVMRPFGVELAAKRMTRFAWRD 537
                 +++     +D  +F+NS +    G++ A   T ++R  G + +A+R+ R  WR+
Sbjct: 497 FGVCGTLALHDTASSDLVSFINSMIGQVVGVVVAARVTRLVRSVGADWSARRIQRATWRE 556

Query: 538 IVEM--TEPATLAEHRQVGVQMLDRLMQHLPRLSQTGQD-SGV----ALRDLRVGLNLLD 590
           + +M  +     A+     V+MLDR+    PR++Q G    GV    ALRDLR+G +   
Sbjct: 557 LGDMAASSQPQYAQSDAYAVRMLDRIGLLAPRIAQAGGTVEGVAANDALRDLRMGAD--- 613

Query: 591 LLAYMPRAGQQARERLNTVVEEVGAHYAACLRAGERLHAPAALLRNMERARLALNLDELY 650
            +A + R   Q     +  +    A +      G     PA LL  ++ A  A+      
Sbjct: 614 -IAVLQRVRGQLPTSTSAALLGGIARFFRQRGEGRMNPRPADLLPQIDEALNAVLGAPAS 672

Query: 651 ERGDARTHLLHALSGLRLALLPGVEVMLEPAEQPQLPPGLDGAPL 695
               A    + AL GLR  L             P  PP L GAP+
Sbjct: 673 AAPAASRSAVTALVGLRRNLF------------PDAPPMLAGAPV 705