Pairwise Alignments

Query, 695 a.a., putative efflux transporter from Pseudomonas putida KT2440

Subject, 316 a.a., Tetrapartite efflux system, inner membrane component FusBC-like from Sphingobium sp. HT1-2

 Score =  154 bits (388), Expect = 8e-42
 Identities = 105/308 (34%), Positives = 160/308 (51%), Gaps = 8/308 (2%)

Query: 13  DWFYGVRTFGASMIALYIALLMQLPRPYWAMATVYIVSSPFVGPTSSKALYRAVGTLLGA 72
           D  + ++ F ++++A YIAL + L RPYWA+ T YIV+ P  G  SSKA++R  GT++GA
Sbjct: 10  DALFTLKAFLSAIMAYYIALRIGLERPYWAIITSYIVAQPLAGAVSSKAIFRLFGTVVGA 69

Query: 73  GGAIFLVPPLVQSPLLLSIAVALWTGTLLFLSLNLRTANNYVLMLAGYTLPMIALAVVDN 132
             AI LVP L   P LL +A+A W G   +++L  RT   Y  +LAGYT  +IAL  VD 
Sbjct: 70  LVAIVLVPTLGNVPELLCLALAAWLGLCTYVALLDRTPRAYTFLLAGYTAGIIALPTVDV 129

Query: 133 PLAVFDVASSRAQEICLGIVCAAVVGAIFWPRRLAPVVVGATGNWFNEAIRYSDTYLARD 192
           P  +F VAS R QEI +GI+ A +V ++ +PR ++  ++        +A R++   L   
Sbjct: 130 PATIFTVASLRTQEIAIGIISATLVHSLVFPRTVSARMMARIDVILADAERWTRDSLTHQ 189

Query: 193 ASADKVGGMRGAMVTTFNSLELMIGQLAHEGAGPHTLKNA--RELRGRMIHLLPVIDALD 250
            S   V   R  + T  + L  +   L  E +  H LK    R L  ++  LLP+  A++
Sbjct: 190 QSDVLVARDRRQLATDIHELHQLSAHLPFE-SSRHRLKAGMLRALETQLCLLLPLASAVE 248

Query: 251 DALVALE--GRAPAQFAQLQPVLEAAREWLKGTADSASVAHWATLHEQIGRLQPATAALD 308
           D +  L+  G  P+   +L   LE A  WL G     +++    L  +    +P  A   
Sbjct: 249 DRVQQLQVNGGLPSPVKEL---LEDAVLWLAGAEQGCTMSEVDILRRRARACEPDCAKFV 305

Query: 309 QRAELLLS 316
               +L+S
Sbjct: 306 PWKAVLIS 313