Pairwise Alignments

Query, 272 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 393 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score = 68.2 bits (165), Expect = 3e-16
 Identities = 50/156 (32%), Positives = 71/156 (45%), Gaps = 5/156 (3%)

Query: 71  RRQALQGSVSALNDLGWIWLNGKYWRADTVLAGHLLRMAALQGNAAAWFNLGQQHYFGKG 130
           R  A QG   A  +LG +   G+   +   +A    + AA QG+A A F LG  +  G G
Sbjct: 222 REAAKQGDPQAQFNLGNMIQQGRGVESSAEVAAKWFKQAAEQGDAGAIFALGALYEAGTG 281

Query: 131 IDPSYVQAAECYRQAFDRGMLHAAAALGDLYEEEVCDGDLEWQVDLVQAYQWFLRGAEQG 190
           ++   +QA E YRQA D+G+  A   L ++  +           D  +A     R AEQG
Sbjct: 282 VERDEIQAVELYRQAADQGLALALHNLANMLRQ-----GRGTDADPFEAAMLCRRAAEQG 336

Query: 191 EARCRFEMGYRLMHGLHVEANLKAALYWLELAAAAG 226
               ++     L  GL VE N  AA+ W   AA +G
Sbjct: 337 LPEAQYNYAAMLALGLGVEKNEDAAIRWFRRAAKSG 372



 Score = 58.9 bits (141), Expect = 2e-13
 Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 10/162 (6%)

Query: 106 LRMAALQGNAAAWFNLGQQHYFGKGIDPSYVQAAECYRQAFDRGMLHAAAALGDLYEEEV 165
           LR A  +G+ AA   LG  +  GKG+     +A   Y  A   G      +LG +Y    
Sbjct: 149 LRAAVDKGDLAAMVALGNAYREGKGVAVDPAEAVRLYTLAAKAGDARGQYSLGVMY---- 204

Query: 166 CDGDLEWQVDLVQAYQWFLRGAEQGEARCRFEMGYRLMHGLHVEANLKAALYWLELAAAA 225
            D  L        A +WF   A+QG+ + +F +G  +  G  VE++ + A  W + AA  
Sbjct: 205 -DLGLGVAQSNAHALKWFREAAKQGDPQAQFNLGNMIQQGRGVESSAEVAAKWFKQAAEQ 263

Query: 226 GVVQAAEELAVHFSS-----RDAVRYQEWRDRAVQMGSTLAL 262
           G   A   L   + +     RD ++  E   +A   G  LAL
Sbjct: 264 GDAGAIFALGALYEAGTGVERDEIQAVELYRQAADQGLALAL 305



 Score = 58.2 bits (139), Expect = 3e-13
 Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 5/168 (2%)

Query: 68  VDLRRQALQGSVSALNDLGWIWLNGKYWRADTVLAGHLLRMAALQGNAAAWFNLGQQHYF 127
           V LR    +G ++A+  LG  +  GK    D   A  L  +AA  G+A   ++LG  +  
Sbjct: 147 VALRAAVDKGDLAAMVALGNAYREGKGVAVDPAEAVRLYTLAAKAGDARGQYSLGVMYDL 206

Query: 128 GKGIDPSYVQAAECYRQAFDRGMLHAAAALGDLYEEEVCDGDLEWQVDLVQAYQWFLRGA 187
           G G+  S   A + +R+A  +G   A   LG++ ++      +E   ++  A +WF + A
Sbjct: 207 GLGVAQSNAHALKWFREAAKQGDPQAQFNLGNMIQQ---GRGVESSAEV--AAKWFKQAA 261

Query: 188 EQGEARCRFEMGYRLMHGLHVEANLKAALYWLELAAAAGVVQAAEELA 235
           EQG+A   F +G     G  VE +   A+     AA  G+  A   LA
Sbjct: 262 EQGDAGAIFALGALYEAGTGVERDEIQAVELYRQAADQGLALALHNLA 309



 Score = 54.3 bits (129), Expect = 4e-12
 Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 10/156 (6%)

Query: 107 RMAALQGNAAAWFNLGQQHYFGKGIDPSYVQAAECYRQAFDRGMLHAAAALGDLYEEEVC 166
           R AA QG+  A FNLG     G+G++ S   AA+ ++QA ++G   A  ALG LYE    
Sbjct: 222 REAAKQGDPQAQFNLGNMIQQGRGVESSAEVAAKWFKQAAEQGDAGAIFALGALYE---- 277

Query: 167 DGDLEWQVDLVQAYQWFLRGAEQGEARCRFEMGYRLMHGLHVEANLKAALYWLELAAAAG 226
                 + D +QA + + + A+QG A     +   L  G   +A+   A      AA  G
Sbjct: 278 -AGTGVERDEIQAVELYRQAADQGLALALHNLANMLRQGRGTDADPFEAAMLCRRAAEQG 336

Query: 227 VVQAAEELAVHFSSRDAVRYQE-----WRDRAVQMG 257
           + +A    A   +    V   E     W  RA + G
Sbjct: 337 LPEAQYNYAAMLALGLGVEKNEDAAIRWFRRAAKSG 372



 Score = 25.8 bits (55), Expect = 0.002
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 9/38 (23%)

Query: 157 LGDLYEEEVCDGDLEWQV--DLVQAYQWFLRGAEQGEA 192
           LGDLY        L +QV  DL +A  W +R A QG A
Sbjct: 26  LGDLYR-------LGYQVKRDLDEAVVWLVRSARQGNA 56