Pairwise Alignments

Query, 287 a.a., ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 275 a.a., Bicarbonate transport ATP-binding protein CmpD from Xanthobacter sp. DMC5

 Score =  181 bits (459), Expect = 2e-50
 Identities = 106/235 (45%), Positives = 149/235 (63%), Gaps = 9/235 (3%)

Query: 9   TASNLSRVATPPLLKVDNLSLEYRTAQRVVRATHQVSFEVDRADRFVLLGPSGCGKSTLL 68
           TA   +  A+PP L++ +L+  + T  + +     ++ ++   +   ++G SGCGKSTLL
Sbjct: 2   TAPASAIAASPPKLEIRHLNKSFGTGAQQIEILRDINLDLAANEFVSVVGTSGCGKSTLL 61

Query: 69  KAVAG---FIQPQEGQ----ILLQGQTVRGPGPDRIVVFQEFDQLPPWKTVKQNVIFPLL 121
             VAG   F  P  G+    + + G  V   G DR VVFQ +  LP W T +QNV F L 
Sbjct: 62  SIVAGLETFDDPSGGRDYSPVRIDGAPVFDAGLDRGVVFQSYTLLP-WLTAQQNVEFALQ 120

Query: 122 VSGQLKRAEAEERALHYLEKVGLAAFADAYPHTLSGGMKARVAIARALATQPKILLMDEP 181
            +G ++ AE    A  ++  V L  FA+AYP  LSGGMK RVAIARAL+ +PK+LLMDEP
Sbjct: 121 AAG-MEAAERRRVAEEHIALVKLERFANAYPSELSGGMKQRVAIARALSYRPKMLLMDEP 179

Query: 182 FAALDALTRRKMQEELLLLWEEVRFTLLFVTHSIEEALVVGNRILLLSPHPGRVR 236
           F ALDALTR++MQE L+ +WE+ R T+LFVTH +EEA+ + +RI+++   PGRVR
Sbjct: 180 FGALDALTRQQMQELLMQVWEQHRLTVLFVTHDVEEAVYLSDRIVVMGIGPGRVR 234