Pairwise Alignments

Query, 287 a.a., ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 285 a.a., Bicarbonate transport ATP-binding protein CmpD from Xanthobacter sp. DMC5

 Score =  192 bits (489), Expect = 5e-54
 Identities = 102/237 (43%), Positives = 149/237 (62%), Gaps = 3/237 (1%)

Query: 3   APLPGHTASNLSRVATPPLLKVDNLSLEYRTAQRVVRATHQVSFEVDRADRFVLLGPSGC 62
           A +P  + + L+  A P ++ V ++   +      + A   +   ++  +   LLGPSGC
Sbjct: 8   ATMPAPSPTVLANAARPHIV-VSDVDKRFVIPGGEIVALKDIDLTINEGEFVCLLGPSGC 66

Query: 63  GKSTLLKAVAGFIQPQEGQILLQGQTVRGPGPDRIVVFQEFDQLPPWKTVKQNVIFPLLV 122
           GKSTLL A+AGF  P  G I + G+ V+ PGPDR +VFQE+  L PW TV QN+ F L +
Sbjct: 67  GKSTLLNAIAGFSAPTTGTITVDGRAVKDPGPDRGMVFQEY-ALFPWMTVAQNIAFGLEI 125

Query: 123 SGQLKRAEAEERALHYLEKVGLAAFADAYPHTLSGGMKARVAIARALATQPKILLMDEPF 182
            G + RA+ E +    L  + LA F D +P  LSGGM+ RVAIAR LA    ++LMDEPF
Sbjct: 126 KG-MSRAQIEPKVNELLAMLKLAEFRDRFPKDLSGGMRQRVAIARVLALDSPVMLMDEPF 184

Query: 183 AALDALTRRKMQEELLLLWEEVRFTLLFVTHSIEEALVVGNRILLLSPHPGRVRAEV 239
            ALDALTRR +Q+EL+ +W     T++FVTHSIEE++ + +RI++L+  PG ++ ++
Sbjct: 185 GALDALTRRSLQDELIRIWSATGKTIVFVTHSIEESIYLADRIVVLTYRPGTIKRDI 241