Pairwise Alignments

Query, 287 a.a., ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 279 a.a., Bicarbonate transport ATP-binding protein CmpD from Xanthobacter sp. DMC5

 Score =  181 bits (460), Expect = 1e-50
 Identities = 109/240 (45%), Positives = 145/240 (60%), Gaps = 5/240 (2%)

Query: 3   APLPGHTASNLSRVATPPLLKVD--NLSLEYRT-AQRVVRATHQVSFEVDRADRFVLLGP 59
           A L    A  L+   +P  +++D  N+   Y +  +  V A   V+  + R +   LLGP
Sbjct: 5   ASLMSPAAPGLAPQFSPEDVQIDIRNVGKVYGSKVEAPVIALDGVTLRIRRGEFISLLGP 64

Query: 60  SGCGKSTLLKAVAGFIQPQEGQILLQGQTVRGPGPDRIVVFQEFDQLPPWKTVKQNVIFP 119
           SGCGKSTLL  +AGF     GQ+L  G+ +  P P R VVFQ++  L  W TV+QNV F 
Sbjct: 65  SGCGKSTLLGIIAGFQSATSGQLLQDGRPITKPDPSRTVVFQDY-ALFGWMTVQQNVEFG 123

Query: 120 LLVSGQLKRAEAEERALHYLEKVGLAAFADAYPHTLSGGMKARVAIARALATQPKILLMD 179
           L   G + +AE  E A   +  V L  F D +PH +SGGMK R AIARALA  P ILLMD
Sbjct: 124 LKAKG-MPKAERAEIARALIATVRLNGFEDKFPHQMSGGMKQRAAIARALAPDPDILLMD 182

Query: 180 EPFAALDALTRRKMQEELLLLWEEVRFTLLFVTHSIEEALVVGNRILLLSPHPGRVRAEV 239
           EPF ALDA TR  +QEE+  +  E   T++FVTH I+EA+ + +R++++SP PGRVR EV
Sbjct: 183 EPFGALDAQTRVLLQEEIARISSEAGKTVIFVTHGIDEAVFLADRVVVMSPRPGRVREEV 242