Pairwise Alignments

Query, 339 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 338 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  206 bits (524), Expect = 7e-58
 Identities = 118/339 (34%), Positives = 184/339 (54%), Gaps = 6/339 (1%)

Query: 3   KSISRLAASIGLGASLVVGSLAAPAVAQAEGKIRIAEQFGIVYLLLNVVRDQHLIEKHGK 62
           K ++RLA      A+ +   LA PA A    ++R+    G+ YL + V  +  LIEKH  
Sbjct: 2   KHLARLAVLAVALAATIAPPLARPAAA---AEVRVVSGLGLCYLPMIVAAENKLIEKHAA 58

Query: 63  EQGI-DIEVDWAQLSGGSAVNDALLSGSVDIAGAGVGPLLTVWDRTKGRQNVKAVASLGN 121
             G+ D +V + QL+ G A+ DAL+SG+ DIA AG   +L +WD+T     VK + ++ +
Sbjct: 59  ALGVPDAKVVYTQLTSGPAITDALISGNADIAMAGTSVMLNLWDKTVKFAPVKGMMAICD 118

Query: 122 FPYYLVSSNPNVKTIADISDKDRIAVPAVGVSVQSRFLQYAAAQQWGDKEYNRLDKYTLA 181
            P Y  + +P + +I D    DRIA+ A   +  +  L+ A AQ +G  + N+ D   + 
Sbjct: 119 SPIYFNTIDPAITSIKDFKPTDRIAMAAGKGTQHALILEMATAQAFGFDQRNKFDTLAIT 178

Query: 182 VPHPDATAALLAGGTELNGHFSNPPFQDQVLANKDVHVVLNSYDLL-GPNSPTLLFATEK 240
           + HPD  AALL+GG     H +  PF    LAN +V  +L+SYD+  G N+    +A +K
Sbjct: 179 MSHPDGVAALLSGGAVARTHVTTVPFIQMELANPNVRTILSSYDVTGGANTLITAYANDK 238

Query: 241 FRKDNPKTYKAFVDALAEAADFAQKDKAAAADTYIRVTKAKIDRDALIKLIDNP-QYEFT 299
           +R  NPK Y A   AL EA      DK AAA  + R  K+K+    ++ ++++P    F+
Sbjct: 239 WRAANPKLYAATYAALTEAMGLIAADKTAAAQAFKRFDKSKLSEVEIVAILNDPNMMSFS 298

Query: 300 VTPKNTYKLADFLYRVGAIKHKPQSWKDYFFQDERPLQG 338
            TP+     A+++++ G +K+ P SWKD FF +   L G
Sbjct: 299 PTPRKVMVFAEYMHKTGLLKNLPTSWKDVFFSNVHDLPG 337