Pairwise Alignments

Query, 339 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 335 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  237 bits (604), Expect = 4e-67
 Identities = 132/328 (40%), Positives = 203/328 (61%), Gaps = 5/328 (1%)

Query: 15  GASLVVGSLAAPAVAQAEGKIRIAEQFGIVYLLLNVVRDQHLIEKHGKEQGI-DIEVDWA 73
           GA +++ ++ + A A+ +  + IA Q  + +L L ++ D+ L+EK    +G+ +++  + 
Sbjct: 10  GALVLLAAMTSVAAAEVDN-VTIARQPSLGHLPLMIMEDRGLLEKEAAARGVVNLKTRYI 68

Query: 74  QLSGGSAVNDALLSGSVDIAGAGVGPLLTVWDRTKGRQN-VKAVASLGNFPYYLVSSNPN 132
           +L+GG+A+NDALLSG++  A  GV PL+ +W +TK   N VKA A++ + P  L +SNPN
Sbjct: 69  KLAGGAAMNDALLSGAIQFAAGGVPPLVLLWAKTKDGSNPVKAAAAMNSMPLLLNTSNPN 128

Query: 133 VKTIADISDKDRIAVPAVGVSVQSRFLQYAAAQQWGDKEYNRLDKYTLAVPHPDATAALL 192
           V+++ D + KD+IA+PAV VSVQ+ FLQ AA ++ G    N LDK T+ + HPD  AALL
Sbjct: 129 VRSLKDFTAKDKIALPAVKVSVQAMFLQMAAEKELGPDRRNDLDKLTVTLSHPDGMAALL 188

Query: 193 AGGTELNGHFSNPPFQDQVLANKDVHVVLNSYDLLG-PNSPTLLFATEKFRKDNPKTYKA 251
           A G E+  HF+  P Q+  L    VH VLN++D+LG P++  +++ T +F  DNPK Y A
Sbjct: 189 A-GNEVTAHFTAAPIQELELKKPGVHTVLNTFDVLGQPSTFNVVWTTTRFANDNPKIYAA 247

Query: 252 FVDALAEAADFAQKDKAAAADTYIRVTKAKIDRDALIKLIDNPQYEFTVTPKNTYKLADF 311
           F  AL +A     +DK+AAA  Y+R+     +   +  ++++PQ  FT TP+   K ADF
Sbjct: 248 FFAALEDAIAIINRDKSAAARDYVRLAGDGSEVALIEGILNDPQVTFTTTPQAIQKYADF 307

Query: 312 LYRVGAIKHKPQSWKDYFFQDERPLQGS 339
           + R G I    QSWKD F  +     GS
Sbjct: 308 MTRTGMIAATAQSWKDLFLPNVHGKPGS 335