Pairwise Alignments

Query, 339 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 337 a.a., Putative aliphatic sulfonates-binding protein from Pseudomonas sp. DMC3

 Score = 55.8 bits (133), Expect = 1e-12
 Identities = 73/274 (26%), Positives = 124/274 (45%), Gaps = 27/274 (9%)

Query: 14  LGASLVVGSLAAPAVAQAEGKIRIAE---QFGIVYL---LLNVVRDQHLIEKHGKEQGID 67
           L A  + G LA  A A+   +IRIA      G  +    +++V+RDQ + EK   EQGI 
Sbjct: 12  LAAPALAGFLALGAQAEELKEIRIAVPDLSAGTQHSGGGIVDVLRDQQIFEKAFAEQGIK 71

Query: 68  IEVDWAQLSG-GSAVNDALLSGSVDIAGAGVGPLLTVWDRTKGRQNVKAVASLGNFPYYL 126
           I+  W+   G G  +N+A  +G VD+  A +G L  +  ++ G       A+      YL
Sbjct: 72  IQ--WSFFKGAGPVINEAFANGQVDL--AYLGDLAAIIGKSNGLDTRLLSATARGVKQYL 127

Query: 127 -VSSNPNVKTIADISDKDRIAVPAVGVSVQSRFLQYAAAQQWGDKEYNRLDKYTLAVPHP 185
            V     +KT+ D+  K R+A+   G + Q  F    A+Q   +K+        L V + 
Sbjct: 128 GVVPGSGIKTLQDLKGK-RVAI-FRGTATQLSFDAALASQGLSEKD--------LKVINL 177

Query: 186 DATAALLA-GGTELNGHFSNPPFQDQVLANKDVHVVLNSYDLLGPNS-PTLLFATEKFRK 243
           D  AA+ A    +++  + +      + A     + LN+ DL G  S   +L    KF  
Sbjct: 178 DFNAAVSALAAKQIDASWGSSAL-SALQAKGLAELPLNTKDLGGAGSVQAVLLGNGKFVD 236

Query: 244 DNPKTYKAFVDALAEAADFAQKDKAAAADTYIRV 277
            +P+     + A  +A ++  +D  +  D Y+++
Sbjct: 237 AHPEVIAKLLKAQQQAVEWLTQD--SNKDAYVQL 268