Pairwise Alignments

Query, 339 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 326 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  367 bits (942), Expect = e-106
 Identities = 174/324 (53%), Positives = 246/324 (75%), Gaps = 1/324 (0%)

Query: 17  SLVVGSLAAPAVAQAEGKIRIAEQFGIVYLLLNVVRDQHLIEKHGKEQGIDIEVDWAQLS 76
           +L++G  A+P  AQAEG I IA+QFGI YL+L+VVRDQ LIEK GK+QG+DI+VDW  LS
Sbjct: 3   ALILGLGASPLAAQAEGSISIAQQFGIGYLILDVVRDQQLIEKQGKQQGLDIKVDWRTLS 62

Query: 77  GGSAVNDALLSGSVDIAGAGVGPLLTVWDRTKGRQNVKAVASLGNFPYYLVSSNPNVKTI 136
           G +A+N+ALLSG++D+A AGV P+LT+WDRT G+QNV+A+ASLG+ P YL+S+NP VKT+
Sbjct: 63  GATAINEALLSGALDVASAGVPPMLTLWDRTLGKQNVRAIASLGSMPNYLLSNNPAVKTL 122

Query: 137 ADISDKDRIAVPAVGVSVQSRFLQYAAAQQWGDKEYNRLDKYTLAVPHPDATAALLAGGT 196
            D+SD+DRIA PA GV  QSR LQ   A+ +GD++Y R D  T+++PHPDA AAL+AGG+
Sbjct: 123 RDLSDRDRIATPAAGVGFQSRTLQIETAKLFGDRDYKRFDNITVSLPHPDANAALIAGGS 182

Query: 197 ELNGHFSNPPFQDQVLANKDVHVVLNSYDLL-GPNSPTLLFATEKFRKDNPKTYKAFVDA 255
           E+  HFS+PPFQ Q L + +VH +L+SYD+L GP +  +L+ T+KF  +NPKTY+AF DA
Sbjct: 183 EITAHFSSPPFQYQALEHPNVHKILSSYDVLGGPGTFNVLYTTQKFHDENPKTYRAFYDA 242

Query: 256 LAEAADFAQKDKAAAADTYIRVTKAKIDRDALIKLIDNPQYEFTVTPKNTYKLADFLYRV 315
           L +AAD    +KAAAA+TYIR   +++    + +++++ + +FT+ P+ T   A+ L+++
Sbjct: 243 LKDAADIINANKAAAAETYIRAENSRLPLPLVKRIVEDTEVDFTIVPQRTSVYAEKLHQL 302

Query: 316 GAIKHKPQSWKDYFFQDERPLQGS 339
           G +K+K  SWKDYFF +     GS
Sbjct: 303 GVLKNKAGSWKDYFFNEIHSQPGS 326