Pairwise Alignments

Query, 718 a.a., Toxin secretion ATP-binding protein from Pseudomonas putida KT2440

Subject, 570 a.a., type I secretion system permease/ATPase from Variovorax sp. OAS795

 Score =  248 bits (633), Expect = 6e-70
 Identities = 176/551 (31%), Positives = 287/551 (52%), Gaps = 35/551 (6%)

Query: 176 SLVINLIALAAPLFVMNVYDRVVPNQATSTLWVLAIGIAGAYIFDLILKGLRGLCLDLAG 235
           S ++NL+ LA  LF++ V+DRV+ +Q+  TL VL +G+A A    L+L  LR     +AG
Sbjct: 19  SFLVNLLLLAPALFMLQVFDRVLTSQSRETLLVLLLGVAVALGLMLMLDYLRSRLQGVAG 78

Query: 236 KKTDLIISATLFERIVGMSMKYRPARVGSFA--QNIHEFQGLRDFLASLTLTSLIDLPFT 293
                 + A     +V   M  R AR    A  + + +   LR+  +S  L +L D+P+T
Sbjct: 79  N-----LIADQLSPVVARVMLARAARRAERAPCEGLRDVAALRNLFSSQGLLALFDVPWT 133

Query: 294 ILILIVIAIIGGHLVWIPIIAFPLALGIGYALQRPLMATMERTMALASERQSSLIETLAG 353
            + + VI        W+   A P+ LG+  A    LM  +       + R    ++  A 
Sbjct: 134 FVYVAVI--------WL---AHPM-LGMAAAAASVLMLVLAVVNDRITRRDIESLQKEAA 181

Query: 354 -----LDAVKVNNAESERQYMWEQTLGTLSRLELRVKVLS------SLAMN-ITLLIQQL 401
                L++   N   ++   M E  +G    L   V  L       S+AM  +T   +Q 
Sbjct: 182 RATRYLESSMQNAELAQSLGMGEAVIGRWRHLNAGVAALQGPTARKSVAMAALTRTTRQA 241

Query: 402 AGVAMICVGVYLIIDGNLSMGGLVACYMLSGRALGPLGQLNGLLARYQQAKVTMVSTDHM 461
             V +  +G YL+I G  + G LVAC +L GRAL P+ Q+ G      + ++       +
Sbjct: 242 VQVLLQALGAYLVITGEGTPGILVACTILLGRALAPIEQVVGSWRVLAEGRLAFARLSKV 301

Query: 462 MDLPQERNFEERPLSRKVLQGSVEFRGVDFTYPNQQNLALKNINLTIRPGEKVGIIGRSG 521
           +   +    +   ++     G +   G+ F     + + L  ++L++ PGE + I G SG
Sbjct: 302 LGAAER---QPPRMALPAPSGRLHAEGLVFRPAQGERMILAGVSLSLEPGESLAITGSSG 358

Query: 522 SGKSSLAKLIVGLYEADGGSLLVDGVDIRQIDVSELRHNIGYVPQDIQLLAGTLRDNLVS 581
           +GKS+L +L+ GL+E + G + +DGVD+ Q    EL   +GYVPQD++L AGT+  N ++
Sbjct: 359 AGKSTLVRLLTGLWEPNAGVVRLDGVDLAQWPREELGPWLGYVPQDVELFAGTVAAN-IA 417

Query: 582 GARYIEDELILQAAELAGVHEFARLHPDGYELQVGERGQNLSGGQRQNVALGRALLLNPQ 641
               ++ + ++QAA+ AGVH      P+GY+  V   G  LS GQRQ +AL RAL  NP+
Sbjct: 418 RLGTVDPDKVVQAAQRAGVHALILTLPEGYDTVVDSMGVMLSPGQRQRIALARALYGNPK 477

Query: 642 ILLLDEPTSAMDNTGEERLKQRLQAVVEGKTVLLVTHRASLLSLVDRLIVIDRGQIVADG 701
           +L+LDEP S +D  GE  L + L+A+    TV++VTHR++L+  +D+L+V++ G++   G
Sbjct: 478 LLVLDEPNSNLDGAGELALGEALKALRGEVTVVVVTHRSALVQHMDKLLVLEAGRVKQYG 537

Query: 702 PKAAVMDALKK 712
           P A VM  +++
Sbjct: 538 PVAEVMQTIRR 548