Pairwise Alignments

Query, 458 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 447 a.a., Type I secretion system membrane fusion protein PrsE from Xanthobacter sp. DMC5

 Score =  159 bits (401), Expect = 2e-43
 Identities = 117/406 (28%), Positives = 194/406 (47%), Gaps = 9/406 (2%)

Query: 61  WASVAPIDEVTRGEGKAIPSSKVQKIQNLEGGIVAEIFAKEGQIVEVGQPLLRLDETRFA 120
           WA++A +D      G     SK Q +Q+LEGGIVA I  +EGQ V   + L RLD T+  
Sbjct: 43  WAAMARVDGAVVAPGVIGVESKRQVVQHLEGGIVAAILVQEGQTVRRDETLFRLDPTQSR 102

Query: 121 SNVGETEADRLAMALRVERLSAEVEDRPLI-----IDEKLRKAAPNQAASEE-SLYQSRR 174
           +N     A R A      RL AE +D P I     + E  R  A  +A +++ + ++ RR
Sbjct: 103 ANDEAALAQRRAALTLEARLVAERDDAPAITFPPELLELARVPAVREAMADQIAQFRDRR 162

Query: 175 QQLQDEIGGLQQQLVQRQQELREYSSKRTQYANSLELLRKEISMSEPLVATGAISQVEVL 234
              Q +I  L  ++VQ   EL   + +R      L  +  E++    L     +++  V 
Sbjct: 163 AAFQSQIDILNGRIVQLGHELEGLAQERASARQQLAFVEDELTAVRELERKHLVNKSRVS 222

Query: 235 RLRRAEVENRGQLDSTALAIPRAEAAIREVQSKIEETRGKFRSEALTQLNEARTELNKAT 294
            L R +    G +        +A  +I E + +I +   +   +  +QL + R +L +  
Sbjct: 223 SLEREKARLDGLVGRNIADEAKARGSIGEQKMQIVQLTQQRAEDVGSQLLDIREKLAELK 282

Query: 295 ATSKALDDRVHRTLVTSPVRGIVKQL--LVNTIGGVIQPGSDIIEVVPLDDTLVIEAKIL 352
              +     + R  + +P  GIV+ +   + T+G V++PG  ++E+VP+D  LV+EA++ 
Sbjct: 283 EKVQVTRSVLERIEIRAPSGGIVQNINPRIYTVGAVVRPGDTLLEIVPVDAPLVVEARVP 342

Query: 353 PKDIAFLHPGQEATVKFTAYDYTIYGGLKAKLEQIGADTITDEDKKTTYYLIKLRTDRSH 412
            +DI  L   +   V+F A+       +   L  +  D + DE     Y+L ++  D + 
Sbjct: 343 VQDIDRLDLHEAVEVRFPAFHGRTTPMVLGHLASVSRDRLVDETTHQPYFLARVGVDETD 402

Query: 413 LGTDEKPLLIIPGMVATVDIMTGKKTIMSYLLKPIMKARSEALRER 458
           +  D +  L  PGM A V   TG +T+MSYLL+P+  A + A  ER
Sbjct: 403 VPADLRSRL-QPGMDAEVAFHTGSRTVMSYLLRPLADAMARAFTER 447