Pairwise Alignments

Query, 458 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 438 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

 Score =  218 bits (555), Expect = 3e-61
 Identities = 134/394 (34%), Positives = 204/394 (51%), Gaps = 4/394 (1%)

Query: 66  PIDEVTRGEGKAIPSSKVQKIQNLEGGIVAEIFAKEGQIVEVGQPLLRLDETRFASNVGE 125
           P++ V    G+ IPS +V+ IQ+LEGGIV+ +  KEG  V+ GQPL+ +D      N+ E
Sbjct: 46  PMETVVVAPGRVIPSDRVKSIQHLEGGIVSSVLVKEGDKVKTGQPLVEIDLGGSGLNLEE 105

Query: 126 TEADRLAMALRVERLSAEVEDRPLIIDEKLRKAAPNQAASEESLYQSRRQQLQDEIGGLQ 185
             A   A      RL AE   +PL  +   +         E   YQ+R  + +  + G  
Sbjct: 106 LTARYAATQATRVRLMAESRGQPLRRESFAKDIDEGVFEGETGAYQARALEQRGVMAGAV 165

Query: 186 QQLVQRQQELREYSSKRTQYANSLELLRKEISMSEPLVATGAISQVEVLRLRRAEVENRG 245
             L Q + +  E  +K     + LEL++KE+ +SE L++   + QVEVL  RR     R 
Sbjct: 166 SGLEQARSKKLEQQAKVKGLGDRLELMQKELEISEQLLSEKLVGQVEVLEKRRQAESVRS 225

Query: 246 QLDSTALAIPRAEAAIREVQSKIEETRGKFRSEALTQLNEARTELNKATATSKALDDRVH 305
           +L      +  A+AAI E Q+K+ E  G++R  A  +L     +    +        +  
Sbjct: 226 ELAVARQGVVSADAAITEAQAKMAEAEGRYRRRASDELATVERQFASLSEDLARARTQRS 285

Query: 306 RTLVTSPVRGIVKQLLVNTIGGVIQPGSDIIEVVPLDDTLVIEAKILPKDIAFLHPGQEA 365
           RT+V +P  GIVK L  ++ G V++PG  I+EVVP +D +++EA++ P D  F+  GQ A
Sbjct: 286 RTVVKAPSDGIVKGLRNSSPGWVVKPGESILEVVPDEDEIMVEARLNPNDRGFIEVGQTA 345

Query: 366 TVKFTAYDYTIYGGLKAKLEQIGADTITDE--DKKTTYYLIKLRTDRSHLGTDEKPLLII 423
            VK TAYDY  YG +  K++ + AD   D        YY + +   +SH+G DE    I 
Sbjct: 346 RVKITAYDYLRYGAVDGKVKLVAADADRDPAISNGAPYYRLLISMSQSHVGRDEN--RIT 403

Query: 424 PGMVATVDIMTGKKTIMSYLLKPIMKARSEALRE 457
            GM + VD+  G    + Y+L+P++K R EA RE
Sbjct: 404 AGMESEVDLRVGTDPFIWYILRPVLKLRREAFRE 437