Pairwise Alignments

Query, 458 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 434 a.a., bacteriocin ABC transporter permease from Agrobacterium fabrum C58

 Score =  162 bits (410), Expect = 2e-44
 Identities = 104/404 (25%), Positives = 196/404 (48%), Gaps = 9/404 (2%)

Query: 61  WASVAPIDEVTRGEGKAIPSSKVQKIQNLEGGIVAEIFAKEGQIVEVGQPLLRLDETRFA 120
           WA    I      +G  +  + ++K+Q+  GG+V+E+  ++G  V+ G  ++R+D T   
Sbjct: 32  WAVGTEIVGAVIAQGSLVVETSLKKVQHPVGGVVSELMVRDGDRVKAGDVVMRIDATMTR 91

Query: 121 SNVGETEADRLAMALRVERLSAEVEDRP--LIIDEKLRKAAPNQAA-----SEESLYQSR 173
           +N+            R  RL  E  DR   ++  + LR  A +        +E+ LY+ R
Sbjct: 92  ANLAIVVKSLDQFTARKARLEGE-RDRAASVVFPQSLRDRAGDAEVLAMMNAEQRLYEDR 150

Query: 174 RQQLQDEIGGLQQQLVQRQQELREYSSKRTQYANSLELLRKEISMSEPLVATGAISQVEV 233
           R   + +   L+Q++ Q + E+    ++R        ++ +E+     L   G + +  +
Sbjct: 151 RAVRESKKRQLEQRVRQLRDEISGLEAERAANVREQGMVDEELIRFRSLQERGLLDKSRL 210

Query: 234 LRLRRAEVENRGQLDSTALAIPRAEAAIREVQSKIEETRGKFRSEALTQLNEARTELNKA 293
             L R   +  G +      I   EA I E   +I +   ++  E  + L E    + + 
Sbjct: 211 STLERQATDIDGDIGRLRAGIAGIEAKISETALQILQIDEQWSEEVGSDLREMDARIGEY 270

Query: 294 TATSKALDDRVHRTLVTSPVRGIVKQLLVNTIGGVIQPGSDIIEVVPLDDTLVIEAKILP 353
                A +D++ R  + +P  G+V QL V+T+GGVI PG  I+ +VP  D LV+EAK+ P
Sbjct: 271 VERRVAAEDQLKRVDILAPQDGVVHQLAVHTVGGVIAPGEQIMMIVPEVDKLVVEAKVAP 330

Query: 354 KDIAFLHPGQEATVKFTAYDYTIYGGLKAKLEQIGADTITDEDKKTTYYLIKLRTDRSHL 413
           +DI  ++ GQ   ++F+A++      +   +E+I AD   D+    +YYL+++ T +  +
Sbjct: 331 QDIDQIYFGQVTNLRFSAFNQKTTPEITGTVERISADVTVDQRTGASYYLVRVATSQEQI 390

Query: 414 GTDEKPLLIIPGMVATVDIMTGKKTIMSYLLKPIMKARSEALRE 457
               +   ++PGM     I TG+++++SY LKP++   +   R+
Sbjct: 391 KRLGE-FSLMPGMPVEAFITTGERSVLSYFLKPLLDQANRTFRQ 433