Pairwise Alignments

Query, 648 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 767 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  127 bits (320), Expect = 1e-33
 Identities = 134/435 (30%), Positives = 188/435 (43%), Gaps = 59/435 (13%)

Query: 239 DSLTGLSNRRYFEMQLNNRVSNLEDARAGY----LLLLRVQGLAGLNARLGGQRTDQLLQ 294
           D LTGL NR  F      R+S L +AR G     LL L +     +N  LG    D +L 
Sbjct: 348 DMLTGLPNRLAFA----ERLSALLNARGGATPFALLYLDLDYFKAVNDTLGHDAGDTMLT 403

Query: 295 AVGEQLRRTCASYPETNDLISRSRGGEFAVLAPGMVHE-EAVHLAQALEATLQSLHETGA 353
            + E++R         +D  +R  G EFAV+  G+ HE EA   AQ L   L++    G 
Sbjct: 404 ELAERIRTMLGP----DDFSARLGGDEFAVVLAGVTHEAEATEFAQRLIEALRTPVHIGL 459

Query: 354 SDIDPVACIGLAPFSPGDSPQA--LLKLADEALARAENQPTPGWVCLEQGVAAV------ 405
             I     IG+   SP D      LLK AD AL RA+   T G     +G+A V      
Sbjct: 460 HRIISGCSIGIV-MSPRDGAGVAELLKNADLALYRAK---TDG-----RGIARVFVEEME 510

Query: 406 ---------AADSQHAWHERLDQAFINGHFELFFQPVIECASSQRVLHHKVISRLRDGQG 456
                      D Q AW ER         F L +QP++E A S R+   + + R R  + 
Sbjct: 511 RLVRERREMEVDLQTAWRER--------QFFLLYQPIVE-AESGRIAGFEALLRWRHPER 561

Query: 457 EALPAGRFLPWLERFGWMPRLDVLVLEKVLAHLRG--HDQVLALNLSAATLADPKALQRV 514
             +    F+P  E  G +  L   VL +  A       D  +++NLS       +A ++V
Sbjct: 562 GLVNPTSFIPIAEETGLILPLGAWVLTEACAAATAWPDDLFVSVNLSPIQFRGAEAFRQV 621

Query: 515 FELLGQNAALGPRLVFEIGEEQLPEQ-----AALEQLTRRLHGLGFGLALQRFGGRFSMI 569
              L  +     RL  EI E  L  +     A LEQ +      G  +AL  FG  +S +
Sbjct: 622 RSALESSGLAPSRLEVEITESTLLHEGPMVRATLEQFSEE----GITVALDDFGTGYSSL 677

Query: 570 GNLAHLGLAYLKIDGSYIRNIDHEQHKRLFIEAIQRAAHSIDLPLIAERVETEGERLVLL 629
           G L  L +  +K+D S+I  ++        + AI   A ++ L   AE VETEG+R +L 
Sbjct: 678 GYLRTLSIGRIKVDRSFIEQVETSPQSLAIVRAIIGLARTLGLRCTAEGVETEGQRRLLT 737

Query: 630 EMGVGGIQGQLVGEP 644
             G   +QG L+G P
Sbjct: 738 AEGCSHLQGYLLGRP 752