Pairwise Alignments

Query, 648 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 628 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  124 bits (310), Expect = 2e-32
 Identities = 121/426 (28%), Positives = 190/426 (44%), Gaps = 19/426 (4%)

Query: 230 ERLRAESYQDSLTGLSNRRYFEMQLNNRVSNLEDARAGYLLLLRVQGLAGLNARLGGQRT 289
           E+L   +  D+LTGL NRR F   +    + L   RA  LL++ V G   +N  LG    
Sbjct: 184 EQLAHLAQIDALTGLPNRRQFYRAVE---AALLSGRACGLLMVDVDGFKDINNILGPAAG 240

Query: 290 DQLLQAVGEQLRRTCASYPETNDLISRSRGGEFAVLAPGMVHEEAVHLAQALEATLQSLH 349
           D +L+A+G+ L    +        ++R  G EFA+L  G+  E A   A+ L A +  L 
Sbjct: 241 DDVLRAIGQLLVAEASG----GTAVARVGGDEFAMLVCGLTAEAAKPFARQLLAKISELA 296

Query: 350 ETGASDIDPVACIGLAPFSPGDS--PQALLKLADEALARAENQPTPGWVCLEQGVAAVAA 407
             G  D+   A  G+A  SP D+  P  L+  AD AL  A+ + +         +   A 
Sbjct: 297 PIGHEDMRISASCGIA-LSPRDAQEPVELIGDADLALHAAKAEASANVALYSPALRTDAM 355

Query: 408 DSQHAWHERLDQAFINGHFELFFQPVIECASSQRVLHHKVISRLRDGQGEALPAGRFLPW 467
           D + +  + L +A  NG F LF+QP +  +    +    +I  +   +G   PA  FLP 
Sbjct: 356 DRRLSSID-LHRAVANGEFLLFYQPQVRLSDGALIGAEALIRWMHPSRGLLSPAA-FLPA 413

Query: 468 LERFGWMPRLDVLVLEKVLAHLR------GHDQVLALNLSAATLADPKALQRVFELLGQN 521
           LE     P++   V+E+  A           D  +A+NL A+        + V E L ++
Sbjct: 414 LEGSALAPQVGRWVIEEGCAQAARWRRQGAADFRMAVNLFASQFRAGDLPREVEESLARH 473

Query: 522 AALGPRLVFEIGEE-QLPEQAALEQLTRRLHGLGFGLALQRFGGRFSMIGNLAHLGLAYL 580
                 L  EI E   L + +       RL  +G  +A   FG  ++ +  L    ++ +
Sbjct: 474 GLPPEALELEITENIVLSDHSNAIDALARLRQMGVRIAFDDFGTGYASLSLLTRCPVSCI 533

Query: 581 KIDGSYIRNIDHEQHKRLFIEAIQRAAHSIDLPLIAERVETEGERLVLLEMGVGGIQGQL 640
           K+D S+++ +     +   I AI     ++D+ +IAE +ETE ER  L E      QG L
Sbjct: 534 KLDRSFVQAMLQAPREAAVIAAILEMGRALDMDVIAEGIETEAERAYLAERHCPEGQGYL 593

Query: 641 VGEPAP 646
            G P P
Sbjct: 594 FGRPMP 599