Pairwise Alignments

Query, 648 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 820 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  114 bits (286), Expect = 1e-29
 Identities = 123/447 (27%), Positives = 186/447 (41%), Gaps = 39/447 (8%)

Query: 223 TEQAERSERLRAESYQDSLTGLSNRRYFEMQLNNRVSNLEDARAGY--LLLLRVQGLAGL 280
           T++ +    L  ++  D+LTGL+NRR FE +L   +        G   L+ L +     +
Sbjct: 361 TQERQYIANLSWQATHDALTGLANRREFEFRLEQVLHPTAQQNGGRHALMFLDLDQFKLV 420

Query: 281 NARLGGQRTDQLLQAVGEQLRRTCASYPETNDLISRSRGGEFAVLAPGMVHEEAVHLAQA 340
           N   G    D+LL+ +   L+    S     D ++R  G EF +L        A  +A++
Sbjct: 421 NDTCGHAAGDELLRHICALLQ----SDLREGDTLARLGGDEFGILLENCPAAVAEKIAES 476

Query: 341 LEATLQSLHET--GASDIDPVACIGLAPFSPGDSPQAL---LKLADEALARAENQPTPGW 395
           L  T+Q+LH    G   +  V+ IGL     G +P  L   L+ AD A   A+ +     
Sbjct: 477 LRHTVQNLHFVWKGRPFMTTVS-IGLVHL--GHTPTTLETSLRAADMACYMAKEKG---- 529

Query: 396 VCLEQGVAAVAADSQH--------AWHERLDQAFINGHFELFFQPVIECASSQRVLHH-K 446
                 V    AD           AW +RL  A     F L+ Q +     +     H +
Sbjct: 530 ---RNRVQVYHADDSELSLRFGEMAWVQRLHMALEENRFCLYAQEISPLGQTNGGDGHIE 586

Query: 447 VISRLRDGQGEALPAGRFLPWLERFGWMPRLDVLVLEKVLAHLRGHDQ--------VLAL 498
           ++ RL D  G  +    F+P  ER+G M  LD  V+E V   +    Q        + A+
Sbjct: 587 ILLRLHDEAGRIILPDSFIPAAERYGLMTSLDRWVVENVFKIINRCMQERPGLPMAMCAI 646

Query: 499 NLSAATLADPKALQRVFELLGQNAALGPRLVFEIGEEQ-LPEQAALEQLTRRLHGLGFGL 557
           NLS  T+ D   L  + E           + FEI E   +    +  +    L  LG   
Sbjct: 647 NLSGITIGDDDFLGFLREKFHTYTIPPGMICFEITETSAIANLGSAIRFINELKALGCHF 706

Query: 558 ALQRFGGRFSMIGNLAHLGLAYLKIDGSYIRNIDHEQHKRLFIEAIQRAAHSIDLPLIAE 617
           +L  F    S    L HL + +LKIDGS+++++  +   R  +E I    H +    IAE
Sbjct: 707 SLDDFCAGMSSFAYLKHLPVDFLKIDGSFVKDMLDDPINRAMVEVINHIGHVMGKRTIAE 766

Query: 618 RVETEGERLVLLEMGVGGIQGQLVGEP 644
            VET      LLE+GV   QG L+  P
Sbjct: 767 FVETPQIEQALLEIGVDYAQGYLIERP 793