Pairwise Alignments

Query, 648 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 778 a.a., DeoR faimly transcriptional regulator from Pseudomonas simiae WCS417

 Score =  140 bits (353), Expect = 2e-37
 Identities = 146/571 (25%), Positives = 243/571 (42%), Gaps = 36/571 (6%)

Query: 85  GSNAVLVERHAEPDPGGVPLWFVRLIGLEAAGGDAIVSRGWQQAARVEV---ISHPMFAI 141
           G+ ++L E H +P+P     +  R++ L       + + G     RV +   + H + + 
Sbjct: 216 GTLSLLREGHVDPEPKIHMFYGQRVLSLVLP----LANTGNGDEVRVLLQSPLDHALESF 271

Query: 142 AKLWQSALGSLGWLLLCGAASAVLGALLLRRQLRPLDYMVEQSHAIARREFLSLPELPRT 201
           A L +  LG    +LL   A+A+    L RR  RPL+ +V+ +  I   ++       RT
Sbjct: 272 APLDRQFLGIALAVLLVSLAAALF---LARRVSRPLNALVQAAERIGAGDY-------RT 321

Query: 202 PELRRVVQAMNQMVEKLKALFTEQAERSERLRAESYQDSLTGLSNRRYFEMQLNNRVSNL 261
           P   R       +     A+ +  A R  +L   +  D LTGL NR     +L + +S  
Sbjct: 322 PVRVRSHDEFGLLARAFNAMQSGIAVRERQLAHNALHDPLTGLPNRALAMERLGSAISA- 380

Query: 262 EDARAGYLLLLRVQGLAGLNARLGGQRTDQLLQAVGEQLRRTCASYPETNDLISRSRGGE 321
              R   LL L ++    +N   G Q  +++L+     L  +  +    +D  +R  G E
Sbjct: 381 --RRPVVLLYLGIENYRVINEGFGPQGVEEMLREASRCLSISLLA----SDTAARIAGSE 434

Query: 322 FAVLAPGMVHEEAVHLAQALEATLQSLHETGASDIDPVACIGLAPFSPGDSPQALLKLAD 381
           F +L      + AV  A  L A L      G  ++     +G+A + P D  Q    ++ 
Sbjct: 435 FLLLLENTEVDRAVARADRLYALLTEPQRIGNDELRHEVSMGIAAY-PADGQQVEELISR 493

Query: 382 EALARAENQPTPGWVCLEQGVAAVAADSQHAWHERLDQAFINGHFELFFQPVIECASSQR 441
            A+AR +    PG + + Q    +A   Q      L +A I G   L +QP ++      
Sbjct: 494 AAIARHDAASLPGHLQIYQQDRDLAHQRQITLIRDLRRAAIEGELFLCYQPKLDLKHGHV 553

Query: 442 VLHHKVISRLRDGQGEALPAGRFLPWLERFGWMPRLDVLVLEKVLAHL-----RGHDQVL 496
                ++       G+  P   F+P  ER G M  L + V+E+ +  +     RG    L
Sbjct: 554 CQAEALLRWQHPTLGQVSPV-EFIPLAERTGSMRSLTLWVIEEAIRQIAEWAQRGMLIQL 612

Query: 497 ALNLSAATLADPKALQRVFELLGQNAALGPRLVFEIGEEQL---PEQAALEQLTRRLHGL 553
           ++N+S   LAD     RV  LL        +L+FEI E  +   P QA    +  +L G 
Sbjct: 613 SVNISVDDLADDDLAIRVTALLMTYQVEAEQLIFEITESAIMHNPLQAL--SVLEQLRGC 670

Query: 554 GFGLALQRFGGRFSMIGNLAHLGLAYLKIDGSYIRNIDHEQHKRLFIEAIQRAAHSIDLP 613
           G  L++  FG  +S +  L  L +  LKID S++RN+D      + + +    +H++ L 
Sbjct: 671 GISLSVDDFGTGYSSLAQLQRLPVQELKIDQSFVRNLDSTSGDGVIVRSTIEMSHNLGLK 730

Query: 614 LIAERVETEGERLVLLEMGVGGIQGQLVGEP 644
           ++AE VE      +L +      QG L+  P
Sbjct: 731 VVAEGVEFAPSLKLLKQWNCDTAQGYLISRP 761