Pairwise Alignments

Query, 648 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 653 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score =  135 bits (341), Expect = 4e-36
 Identities = 128/460 (27%), Positives = 209/460 (45%), Gaps = 30/460 (6%)

Query: 204 LRRVVQAMNQMVEKLKALFTEQAERSERLRAESYQDSLTGLSNRRYFEMQLN------NR 257
           L+ V + ++  +E+  A   E  + +  L+  ++ D+LTGL NR  FE +L       NR
Sbjct: 191 LQLVARRLSSSLEEANA---ELTQANHELQKRAFTDALTGLPNRVLFEDRLRHALARMNR 247

Query: 258 VSNLEDARAGYLLLLRVQGLAGLNARLGGQRTDQLLQAVGEQLRRTCASYPETNDLISRS 317
            + L+      +L + + G   +N   G    D++L    E+L R        +D ++R 
Sbjct: 248 ANQLQVEECIAVLFVDLDGFKPINDSFGHSAGDRILCVAAERLARNTRE----SDTVARI 303

Query: 318 RGGEFAVLAPGMVHEEAVHLAQALEATLQSLHE--TGASDIDPVAC-IGLAPFSPGDSPQ 374
            G EF +L  G VH+ A   A+A    L++L E       +  +AC IG+        P 
Sbjct: 304 GGDEFLLLLEG-VHDRA-ECAEAANRVLRALGEPFNVQGKLLQIACSIGIVLHPEQGEPD 361

Query: 375 ALLKLADEALARAENQPTPGWVCLEQGVAAVAADSQHAWHERLDQAFINGHFELFFQPVI 434
            L+  AD A+  A+      +V  E  + A AA  Q      L +A     FEL++QP I
Sbjct: 362 KLVANADAAMYEAKRAGGGNYVMFESHMGADAA-KQLQLQSDLRRAVELKQFELYYQPKI 420

Query: 435 ECASSQRVLHHKVISRLRDGQGEALPAGRFLPWLERFGWMPRLDVLVLEKVLAHL----- 489
                  +   + + R    Q   +    F+   ERFG +  L   +L++    +     
Sbjct: 421 NGVGDS-ISGVEALVRWNHPQHGLIGPTEFIGLAERFGLIVHLGDWILDEACRQIAQWQA 479

Query: 490 RGHDQVLALNLSAATLADPKALQRVFELLGQNAALGPRLVFEIGEEQLPEQAALEQLTRR 549
           +G    +A+NLS   L +   + RV   L ++      L+ EI E    E     Q  R 
Sbjct: 480 QGTQMCVAVNLSVMQLREVDFVARVERALLRHNVPASLLLCEITESVAMEDIKATQ--RT 537

Query: 550 LHGL---GFGLALQRFGGRFSMIGNLAHLGLAYLKIDGSYIRNIDHEQHKRLFIEAIQRA 606
           L GL   G  L++  FG  +S + +L  L    +KID S+++++  ++  R  I+A+ R 
Sbjct: 538 LEGLARVGVFLSIDDFGTGYSSLSHLRKLPARQVKIDRSFVQDLQTKEDARAVIDAVIRL 597

Query: 607 AHSIDLPLIAERVETEGERLVLLEMGVGGIQGQLVGEPAP 646
           AH++ L ++AE VE E +R +LL MG   +QG L   P P
Sbjct: 598 AHALGLSVVAEGVENEAQRDILLAMGCDELQGFLFSRPLP 637