Pairwise Alignments

Query, 648 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 754 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  127 bits (318), Expect = 2e-33
 Identities = 118/449 (26%), Positives = 205/449 (45%), Gaps = 16/449 (3%)

Query: 208 VQAMNQMVEKLKALFTEQAERSERLRAESYQDSLTGLSNRRYFEMQLNNR-VSNLEDARA 266
           +Q+    + ++  L ++  +    L+  ++ D+LT L NRR F      R V +      
Sbjct: 262 LQSKEHDLRRVSVLLSQLDQARASLQQAAHYDALTNLLNRRGFNQVFAERLVEHQASENR 321

Query: 267 GYLLLLRVQGLAGLNARLGGQRTDQLLQAVGEQLRRTCASYPETNDLISRSRGGEFAVLA 326
             ++ L +     +N  LG    D+LL+ +   ++    ++    DL++R  G EF V+ 
Sbjct: 322 LAVMFLDIDHFKRINDSLGHDAGDELLKVIANHIKAATRNH----DLVARFGGDEFCVVT 377

Query: 327 PGMVHEEAVHLAQALEATLQSLHETGASDIDPVACIGLAPF-SPGDSPQALLKLADEALA 385
                +EA HLAQ +   ++   + G   +     IG++ F   G + + LLK AD AL 
Sbjct: 378 SLNSRDEARHLAQRIMQRMKDPIDLGGRRMVMTTSIGISIFPDDGSTAEELLKHADLALY 437

Query: 386 RAENQPTPGWVCLEQGVAAVAADSQHAWHERLDQAFINGHFELFFQPVIECASSQRVLHH 445
           ++++            + A A+ +     E            + +QP+ +  S Q V   
Sbjct: 438 QSKDNGRNSLNFFNDSLKARASIALQLEEELRLALLEERGLCVHYQPIFDLRSGQ-VAKL 496

Query: 446 KVISRLRDGQGEALPAGRFLPWLERFGWMPRLDVLVLEKV---LAHLRGH---DQVLALN 499
           + + R +  Q   L   RF+   E  G +  LD+ VL      LAHL+ H   +  + +N
Sbjct: 497 EALVRWQHPQHGLLGPDRFVGIAEANGLIIDLDLWVLRHACADLAHLQRHGYGEVQVTVN 556

Query: 500 LSAATLADPKALQRVFELLGQNAALGPR-LVFEIGEEQLP-EQAALEQLTRRLHGLGFGL 557
            SA TL+  +    V + L  +A L PR L  E+ E  L  +      L +R+  LG  L
Sbjct: 557 CSAVTLSHDELPNEVEKALF-HAGLAPRHLELEVTENALVGDIQRTVSLLKRVRALGVAL 615

Query: 558 ALQRFGGRFSMIGNLAHLGLAYLKIDGSYIRNIDHEQHKRLFIEAIQRAAHSIDLPLIAE 617
           ++  FG  +S +  L  L L  LKID ++++++   Q  R  ++AI   AH++ L +++E
Sbjct: 616 SIDDFGTGYSSLAYLKRLPLDVLKIDRTFLQDVPGSQKDREIVQAIIAMAHTLHLRVVSE 675

Query: 618 RVETEGERLVLLEMGVGGIQGQLVGEPAP 646
            VET  ++  L   G   +QG L+G P P
Sbjct: 676 GVETAEQQAFLESHGCDYLQGYLLGRPVP 704