Pairwise Alignments

Query, 648 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 1247 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  125 bits (313), Expect = 2e-32
 Identities = 124/431 (28%), Positives = 192/431 (44%), Gaps = 26/431 (6%)

Query: 231  RLRAESYQDSLTGLSNRRYFEMQLNN-----RVSNLEDARAGYLLLLRVQGLAGLNARLG 285
            +L  +++ D LTGL NR  FE +L       +VSN    R G +L L +     +N  LG
Sbjct: 802  KLDYQAHHDPLTGLPNRTLFENRLQGVLTCAQVSN----RQGAVLFLDLDRFKHINDSLG 857

Query: 286  GQRTDQLLQAVGEQLRRTCASYPETNDLISRSRGGEFAVLAPGMVH-EEAVHLAQALEAT 344
                D LL+ + ++L+          D ++R  G EF +L PG+    +A  +A  L A 
Sbjct: 858  HPVGDLLLKGIAQRLKEQVRDV----DTVARLGGDEFIILLPGLHKPSDASTIANKLLAC 913

Query: 345  LQSLHETGASDIDPVACIGLAPF-SPGDSPQALLKLADEALARAENQPTPGWVCLEQGVA 403
              +  + G  +    A IG++ +   G     L++ AD A+ R++ +         + + 
Sbjct: 914  FNAPFQAGEHEFFTSASIGISLYPQDGTDVSTLIRNADAAMYRSKAKGRNRVEAYTRDLT 973

Query: 404  AVAADSQHAWHERLDQAFINGHFELFFQPVIECASSQRVLHHKVISRLRDGQGEALPAGR 463
            A A++     HE L +A       L FQP +   +   V    +I       GE +P   
Sbjct: 974  AQASERIALEHE-LRRAVERNEMSLCFQPKLSLKTQSLVGAEALIRWSHPTFGE-VPPEH 1031

Query: 464  FLPWLERFGWMPRLDVLVLEKVLAHLRGHDQ------VLALNLSAATLADPKALQRVFEL 517
            F+   E  G + +L   VLE+    ++   Q       L++NL+ A L  P   +R+ +L
Sbjct: 1032 FIHLAEENGTILQLGDWVLEQACRQMQAWKQHYQPFGPLSINLAGAQLRHPHLARRIEQL 1091

Query: 518  LGQNAALGPRLVFEIGEEQLPEQA--ALEQLTRRLHGLGFGLALQRFGGRFSMIGNLAHL 575
            L  +      L  EI E  +  QA  AL  L + L  LG  LA+  FG  +S +  L  L
Sbjct: 1092 LKHHQLKAGDLQLEITENFIMSQAEEALAVLYQ-LKKLGVQLAIDDFGTGYSSLSYLKRL 1150

Query: 576  GLAYLKIDGSYIRNIDHEQHKRLFIEAIQRAAHSIDLPLIAERVETEGERLVLLEMGVGG 635
             L  LKID S+IR +  + H      AI     S+ L +IAE VE + ++  L   G   
Sbjct: 1151 PLDILKIDKSFIRGLPDDPHDAAIARAIIALGRSMQLTIIAEGVENQAQQRFLAAEGCEQ 1210

Query: 636  IQGQLVGEPAP 646
            IQG +V  P P
Sbjct: 1211 IQGYIVSLPLP 1221