Pairwise Alignments

Query, 265 a.a., putative transport protein from Pseudomonas putida KT2440

Subject, 237 a.a., predicted inner membrane protein (NCBI) from Escherichia coli BW25113

 Score =  260 bits (664), Expect = 2e-74
 Identities = 129/228 (56%), Positives = 172/228 (75%), Gaps = 3/228 (1%)

Query: 12  WLTSPEIWVAFFTLTALEIVLGIDNIIMISILVSRMPKHMQPRTRIFGLALAMVTRIMLL 71
           W+T P  W+A  TLT LEIVLGIDNII +S++V+++P   +   R  GLA AMV R+ LL
Sbjct: 5   WITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQRAHARRLGLAGAMVMRLALL 64

Query: 72  LSITWVMRLTADLFVVFGQGISGRDLILFFGGLFLLWKSSQEIYHGLEGEDENVEEPKGA 131
            SI WV RLT  LF +F Q IS RDLIL  GGLFL+WK+S+EI+  +EGE+E +   K  
Sbjct: 65  ASIAWVTRLTNPLFTIFSQEISARDLILLLGGLFLIWKASKEIHESIEGEEEGL---KTR 121

Query: 132 GGKFFYTIIQIAIIDIVFSLDSVITAVGMVSHVPVMIAAIVVAVLVMMLCAGAISNFIDK 191
              F   I+QI ++DI+FSLDSVITAVG+  H+ +M+AA+V+AV VMM  A +I +F+++
Sbjct: 122 VSSFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAAVVIAVGVMMFAARSIGDFVER 181

Query: 192 HPSLKMLALSFLIVVGTVLIAEAFEVHVPKGYVYFAMAFSLAVEAINI 239
           HPS+KMLALSFLI+VG  LI E+F++HVPKGY+YFAM FS+AVE++N+
Sbjct: 182 HPSVKMLALSFLILVGFTLILESFDIHVPKGYIYFAMFFSIAVESLNL 229