Pairwise Alignments

Query, 448 a.a., Alginate biosynthesis transcriptional regulatory protein AlgB from Pseudomonas putida KT2440

Subject, 475 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  281 bits (720), Expect = 2e-80
 Identities = 177/465 (38%), Positives = 258/465 (55%), Gaps = 31/465 (6%)

Query: 11  ILLVDDESAILRTFRYCLEDEGYSVATANSAAQAETLLQRQVFDLCFLDLRLGEDNGLDV 70
           IL+V+DE+ I    R  LE   Y V+ A S  +A+       FDL   DLRL    G ++
Sbjct: 4   ILIVEDETIIRSALRRLLERNQYQVSEAGSVQEAQERFSIPTFDLIVSDLRLPGAPGTEL 63

Query: 71  LAQMRIQAPWMRVVIVTAHSAIDTAVDAIQAGAADYLVKPCSPDQLRLATAKQLEVRQLS 130
           + ++    P   V+I+T+++++ +AVD+++ GA DY+ KP   D++  A A+ L  RQ  
Sbjct: 64  I-KLGQGTP---VLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQAVARILRDRQSP 119

Query: 131 ARLEALEGEIRKPKD-----------GLDSHSPAMMAVLETARQVAITDANILILGESGT 179
           +   A +    K  D           G+    P M  +    R+VA TD+N+LI GESGT
Sbjct: 120 SSAPAEQRPAGKAADKPGVDNSNGEIGIIGSCPPMQDLYGKIRKVAPTDSNVLIQGESGT 179

Query: 180 GKGELARAIHGWSKRARKACVTINCPSLNAELMESELFGHTRGAFTGASESTLGRVSQAD 239
           GK  +ARA+H  SKRA+   +++NC ++   L+ESELFGH +GAFTGAS    G V  AD
Sbjct: 180 GKELVARALHNLSKRAKAPMISVNCAAIPESLIESELFGHEKGAFTGASAGRAGLVEAAD 239

Query: 240 GGTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEEMVRESR 299
           GGTLFLDEIG+ PL  Q +LLR +Q+ E  RVG   +++ DVR++AAT+ +L+ + +  +
Sbjct: 240 GGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKSLAKIGQ 299

Query: 300 FREDLLYRLNVITLHLPPLRERSEDILILADRFLARFVKEYSRPARGFSDEARTALLNYR 359
           FREDL YRL+VI L LP LRER  D+  +A  FL R     +R    F+ +A  A+ +Y 
Sbjct: 300 FREDLYYRLHVIALKLPALRERGADVNEIAHAFLLRQSARINRTDLKFAPDAEQAIRHYS 359

Query: 360 WPGNIRELRNVVERASIICPQERVEISHLGM--------GEQPAGSAPRVGAALSLDE-- 409
           WPGN+REL N VERA I+     +    LG+         +   G AP  G + +  E  
Sbjct: 360 WPGNVRELENAVERAVILSESPEISAELLGIDIELSDLEDDDFIGLAPSQGGSNTSHEPT 419

Query: 410 ----LERAHIGAVLAASD--TLDQAAKTLGIDASTLYRKRKQYNL 448
               LE      VL   D  T  + A+ LG+    L+ +R++  +
Sbjct: 420 EDLSLEDYFQHFVLEHQDHMTETELARKLGVSRKCLWERRQRLGI 464