Pairwise Alignments

Query, 448 a.a., Alginate biosynthesis transcriptional regulatory protein AlgB from Pseudomonas putida KT2440

Subject, 465 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  296 bits (759), Expect = 7e-85
 Identities = 187/452 (41%), Positives = 255/452 (56%), Gaps = 19/452 (4%)

Query: 11  ILLVDDESAILRTFRYCLEDEGYSVATANSAAQAETLLQRQVFDLCFLDLRLGEDNGLDV 70
           IL+VDDE  +       L      V  A +   A  +L+++  DL   D R+   +G  +
Sbjct: 5   ILVVDDEPKLCDLLASALGQNDVQVFIAGNGLHALKVLEQEDIDLVISDWRMPGMDGPAL 64

Query: 71  LAQMRIQAPWMRVVIVTAHSAIDTAVDAIQAGAADYLVKPCSPDQLRLATAKQLEVRQL- 129
           LA+++++ P + V+++TA+S +  AV +++ GA DY+ KP   D+L +  AK L+ R + 
Sbjct: 65  LAEIKVRYPHVPVIVMTAYSTVKNAVQSMRNGAYDYIAKPFDIDELDITVAKALQFRDIM 124

Query: 130 --SARLEALEGEIRKPKDGLDSHSPAMMAVLETARQVAITDANILILGESGTGKGELARA 187
             +ARL A E +     D L   SPA   VL+    V  + A IL+ GESGTGK  +ARA
Sbjct: 125 RDNARLRA-ELDEHAQFDSLVGDSPAFRKVLQAVDSVRDSSATILLTGESGTGKEMVARA 183

Query: 188 IHGWSKRARKACVTINCPSLNAELMESELFGHTRGAFTGASESTLGRVSQADGGTLFLDE 247
           IH    RA K  V +NC ++   L+ESE+FGH +GAFTGA    +GR  QAD GTLFLDE
Sbjct: 184 IHKHGSRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFQQADKGTLFLDE 243

Query: 248 IGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEEMVRESRFREDLLYR 307
           +GD PL LQ K+LR +Q++  E VGDP  R+ DVR++AATN NL + V    FREDL YR
Sbjct: 244 VGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLDAVANKEFREDLYYR 303

Query: 308 LNVITLHLPPLRERSEDILILADRFLARFVKEYSRPARGFSDEARTALLNYRWPGNIREL 367
           LNV  + LP LRER EDI  LA  F         +   GFS EA  A+  Y WPGNIREL
Sbjct: 304 LNVFPIPLPSLRERVEDIAPLARHFAQTLSATAGKRITGFSAEALQAMAAYHWPGNIREL 363

Query: 368 RNVVERASIICPQERVE---------ISHLGMGEQPAGSAPRVGAALSLD----ELERAH 414
           +N VERA+I+     +E          S    G+  A  +   G    LD    E+E+A+
Sbjct: 364 QNCVERATIVAASPVIEDIDLPGYLFASKPNQGDVTAILSDGPGIPQDLDAALAEVEKAY 423

Query: 415 IGAVLAASDTLDQAAKT-LGI-DASTLYRKRK 444
           I A L  S+ +  AA   +GI + S  YR +K
Sbjct: 424 ILAALQESNGVQAAAAAKIGISERSFWYRLKK 455