Pairwise Alignments

Query, 448 a.a., Alginate biosynthesis transcriptional regulatory protein AlgB from Pseudomonas putida KT2440

Subject, 451 a.a., sigma-54-dependent Fis family transcriptional regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  288 bits (738), Expect = 2e-82
 Identities = 171/449 (38%), Positives = 262/449 (58%), Gaps = 16/449 (3%)

Query: 11  ILLVDDESAILRTFRYCLEDEGYSVATANSAAQAETLLQRQV--FDLCFLDLRLGEDNGL 68
           +LL+DDE+ + +     LE EGY V  A +A +   LL+      ++   D++L +D+GL
Sbjct: 7   LLLIDDENNLRQVLARVLELEGYQVLQAKNAREGFELLENHAEEVEVVLSDVKLPDDHGL 66

Query: 69  DVLAQMRIQAPWMRVVIVTAHSAIDTAVDAIQAGAADYLVKPCSPDQLRLATAKQLEVRQ 128
           ++L +++ + P   V+++TA   I   V A++ GA DYL K  + +QL +  A+  +  +
Sbjct: 67  NILRKVKEKYPLPEVILMTAFGTIQDGVSAMKQGAFDYLTKGENDEQLIVTVARAADKAR 126

Query: 129 LSARLEALEGEIRKP--KDGLDSHSPAMMAVLETARQVAITDANILILGESGTGKGELAR 186
           L  R+  LE ++      D +  H+PA+    E   +VA TD+ +L+ GE+G GK   A+
Sbjct: 127 LRKRVAELEKQVEAKFTLDTIIGHTPALKQAKELTARVAATDSTVLLEGETGVGKELFAQ 186

Query: 187 AIHGWSKRARKACVTINCPSLNAELMESELFGHTRGAFTGASESTLGRVSQADGGTLFLD 246
           AIH  S R  K  V +NC +   +L+ESE+FG+ +GAFTGA     G   +A+GGT+FLD
Sbjct: 187 AIHSASPRRSKPFVAVNCSAFPKDLLESEIFGYKKGAFTGAMADKKGLFEEANGGTIFLD 246

Query: 247 EIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEEMVRESRFREDLLY 306
           EIG+ P  LQ K LR ++ + + ++GD    + +VRI+AATN +L+      RFR DL Y
Sbjct: 247 EIGEMPPELQAKFLRVLETQSFTKLGDTKPVKVNVRIVAATNRDLQAEAEADRFRPDLYY 306

Query: 307 RLNVITLHLPPLRERSEDILILADRFLARFVKEYSRPARGFSDEARTALLNYRWPGNIRE 366
           RL+V  + +P LRER  DI +LA  FL  +  + +R   G S+E    L +Y W GNIRE
Sbjct: 307 RLSVFKIRVPTLRERQADIPLLAQHFLQLYNLKMNRRLEGMSEEFIQKLKHYPWKGNIRE 366

Query: 367 LRNVVERASIICPQERVEISHLGMGEQPA---GSAPRVGAA---LSLDELERAHIGAVLA 420
           L+NV+ERA I+  +E++   HL     PA    +AP + A+    SL  +ER HI  +L 
Sbjct: 367 LKNVMERAVILADEEKLTPEHL-----PAEFWTAAPSLEASESDTSLSTVERKHIMKILE 421

Query: 421 ASD-TLDQAAKTLGIDASTLYRKRKQYNL 448
            +D    +AA+ L I  +TLYRK ++Y L
Sbjct: 422 QTDGNKTEAARRLHIGLTTLYRKVQEYGL 450