Pairwise Alignments

Query, 448 a.a., Alginate biosynthesis transcriptional regulatory protein AlgB from Pseudomonas putida KT2440

Subject, 467 a.a., sigma-54-dependent Fis family transcriptional regulator from Dickeya dianthicola ME23

 Score =  290 bits (741), Expect = 9e-83
 Identities = 170/458 (37%), Positives = 259/458 (56%), Gaps = 20/458 (4%)

Query: 11  ILLVDDESAILRTFRYCLEDEGYSVATANSAAQAETLLQRQVFDLCFLDLRLGEDN---- 66
           IL+VDD++ IL + +  L  EGY V  +++  Q    L +  FDL  +D+    D     
Sbjct: 7   ILIVDDDAHILASLQMLLSMEGYQVTLSSAVEQVPVQLSQHDFDLILMDMNYQRDTTSGQ 66

Query: 67  -GLDVLAQMRIQAPWMRVVIVTAHSAIDTAVDAIQAGAADYLVKPCSPDQLRLATAKQLE 125
            GL +L +++    ++ VV +T   ++D AV A+QAGA D++ KP   ++L     +Q+ 
Sbjct: 67  EGLVLLEEIKRYDEYLPVVAMTGWGSVDIAVSAMQAGAVDFIQKPWDNERLLNVIRQQIS 126

Query: 126 VRQLSARLEALEGEIRKPKDGLDSH--------SPAMMAVLETARQVAITDANILILGES 177
                   + L+ E    K  L+ H        S  M  ++    Q+A T+ NILILGE+
Sbjct: 127 FSLSQRSGKRLKEENTLLKMELEDHFNGEWVVESAPMKQLMRVVEQIAATETNILILGEN 186

Query: 178 GTGKGELARAIHGWSKRARKACVTINCPSLNAELMESELFGHTRGAFTGASESTLGRVSQ 237
           GTGK  LAR IH  S R  +  V++N   +N  L ESE+FGH +GAFT A ES +GR   
Sbjct: 187 GTGKSLLARVIHQLSPRRDENMVSVNMGCINENLFESEMFGHVKGAFTDARESRVGRFEL 246

Query: 238 ADGGTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEEMVRE 297
           AD GTLFLDEIG+ P+T Q KLLR ++++ +ERVG   T +   RI+AATN  L+  V E
Sbjct: 247 ADKGTLFLDEIGNLPMTQQSKLLRILEERCFERVGSSRTLKTHCRIIAATNAELDVRVAE 306

Query: 298 SRFREDLLYRLNVITLHLPPLRERSEDILILADRFLARFVKEYSRPARGFSDEARTALLN 357
             FR+DL YR N I L +P L ER +DI+ LA  F+ R+ ++Y++PA G S   + AL  
Sbjct: 307 GTFRQDLYYRFNTIELRVPSLVERQQDIMPLALNFIDRYARKYNKPAPGLSLSGQAALSG 366

Query: 358 YRWPGNIRELRNVVERASIICPQERVEISHL------GMGEQPAGSAPRVGAALSLDELE 411
           Y WPGNIREL +++ERA ++C   R+    +         ++ A + P + +  +L ++E
Sbjct: 367 YHWPGNIRELSHLLERAVLLCGSSRLNSDDIFPSLPTTAPQKVAKAEPELVSEATLADIE 426

Query: 412 RAHIGAVLAASD-TLDQAAKTLGIDASTLYRKRKQYNL 448
              +   +A  +    +AA++LG+  S  YR+ ++Y +
Sbjct: 427 ERLLCQRMAKFEGNAVKAARSLGLSRSAFYRRLEKYKI 464