Pairwise Alignments

Query, 448 a.a., Alginate biosynthesis transcriptional regulatory protein AlgB from Pseudomonas putida KT2440

Subject, 441 a.a., fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein from Escherichia coli BL21

 Score =  314 bits (804), Expect = 4e-90
 Identities = 183/439 (41%), Positives = 263/439 (59%), Gaps = 15/439 (3%)

Query: 11  ILLVDDESAILRTFRYCLEDEGYSVATANSAAQAETLLQRQVFDLCFLDLRLGEDNGLDV 70
           IL+VDD+ +     +  L   GY+VA ANS  QA   ++ +VFDL   D+R+ E +G+  
Sbjct: 8   ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRERVFDLVLCDVRMAEMDGIAT 67

Query: 71  LAQMRIQAPWMRVVIVTAHSAIDTAVDAIQAGAADYLVKPCSPDQLRLATAKQLEVRQLS 130
           L +++   P + V+I+TA+S+++TAV+A++ GA DYL+KP   D L+    K L      
Sbjct: 68  LKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL------ 121

Query: 131 ARLEALEGE---IRKPKDGLDSHSPAMMAVLETARQVAITDANILILGESGTGKGELARA 187
           A   +++ E   +   + G+   SPAM  +L     VA ++A +LI G+SGTGK  +ARA
Sbjct: 122 AHTHSIDAETPAVTASQFGMVGKSPAMQHLLSEIALVAPSEATVLIHGDSGTGKELVARA 181

Query: 188 IHGWSKRARKACVTINCPSLNAELMESELFGHTRGAFTGASESTLGRVSQADGGTLFLDE 247
           IH  S R+ K  VT+NC +LN  L+ESELFGH +GAFTGA +   GR  +ADGGTLFLDE
Sbjct: 182 IHASSARSEKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDE 241

Query: 248 IGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEEMVRESRFREDLLYR 307
           IGD    +Q +LLR IQ++E +RVG   T   DVR++AAT+ +L   V   RFR+DL YR
Sbjct: 242 IGDISPMMQVRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAAEVNAGRFRQDLYYR 301

Query: 308 LNVITLHLPPLRERSEDILILADRFLARFVKEYSRPARGFSDEARTALLNYRWPGNIREL 367
           LNV+ + +P LR+R EDI +LA  FL RF +   +  +GF+ +A   L++Y WPGNIREL
Sbjct: 302 LNVVAIEVPSLRQRREDIPLLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIREL 361

Query: 368 RNVVERASIICPQERVEISHLGMGEQPAGSAPRVGAALSLDELERAHIGAVLAASD---- 423
            N VERA ++   E +    L +    A +   +G +  +  L       +LAA +    
Sbjct: 362 ENAVERAVVLLTGEYISERELPLA--IASTPIPLGQSQDIQPLVEVEKEVILAALEKTGG 419

Query: 424 TLDQAAKTLGIDASTLYRK 442
              +AA+ LGI   TL  K
Sbjct: 420 NKTEAARQLGITRKTLLAK 438