Pairwise Alignments

Query, 448 a.a., Alginate biosynthesis transcriptional regulatory protein AlgB from Pseudomonas putida KT2440

Subject, 461 a.a., fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein from Escherichia coli BL21

 Score =  296 bits (757), Expect = 1e-84
 Identities = 175/456 (38%), Positives = 263/456 (57%), Gaps = 22/456 (4%)

Query: 10  RILLVDDESAILRTFRYCLEDEGYSVATANSAAQAETLLQRQVFDLCFLDLRLGEDNGLD 69
           RIL+VDDE  + R        +G+    AN+   A  L      D+  +D+R+ E +G+ 
Sbjct: 6   RILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLFADIHPDVVLMDIRMPEMDGIK 65

Query: 70  VLAQMRIQAPWMRVVIVTAHSAIDTAVDAIQAGAADYLVKPCSPDQLRLATAKQLEVRQL 129
            L +MR       V+++TA++ ++TAV+A++ GA DY++KP   D+L L   + L+++ +
Sbjct: 66  ALKEMRSHETRTPVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNLIVQRALQLQSM 125

Query: 130 SARLEALEGEIRKPKDG--LDSHSPAMMAVLETARQVAITDANILILGESGTGKGELARA 187
              +  L   +        + ++SPAMM + +   ++A++ A++LI GESGTGK  +ARA
Sbjct: 126 KKEIRHLHQALSTSWQWGHILTNSPAMMDICKDTAKIALSQASVLISGESGTGKELIARA 185

Query: 188 IHGWSKRARKACVTINCPSLNAELMESELFGHTRGAFTGASESTLGRVSQADGGTLFLDE 247
           IH  S+RA+   + +NC +L   L+ESELFGH +GAFTGA     G   +A+ GTL LDE
Sbjct: 186 IHYNSRRAKGPFIKVNCAALPESLLESELFGHEKGAFTGAQTLRQGLFERANEGTLLLDE 245

Query: 248 IGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEEMVRESRFREDLLYR 307
           IG+ PL LQ KLLR +Q++E+ER+G   T + D+RI+AATN +L+ MV+E  FREDL YR
Sbjct: 246 IGEMPLVLQAKLLRILQEREFERIGGHQTIKVDIRIIAATNRDLQAMVKEGTFREDLFYR 305

Query: 308 LNVITLHLPPLRERSEDILILADRFLARFVKEYSRPARGFSDEARTALLNYRWPGNIREL 367
           LNVI L LPPLR+R EDI +LA+ FL +F  E  R        A + L  + WPGNIREL
Sbjct: 306 LNVIHLILPPLRDRREDISLLANHFLQKFSSENQRDIIDIDPMAMSLLTAWSWPGNIREL 365

Query: 368 RNVVERASI-----------ICPQERVEISHLGMGEQPAGSAPRVGAALSLDELERAHIG 416
            NV+ERA +           + PQ R  + + G       +AP VG     +E++R    
Sbjct: 366 SNVIERAVVMNSGPIIFSEDLPPQIRQPVCNAG----EVKTAP-VGERNLKEEIKRVEKR 420

Query: 417 AVLAASDTLD----QAAKTLGIDASTLYRKRKQYNL 448
            ++   +  +    + A  LGI    L  K ++Y +
Sbjct: 421 IIMEVLEQQEGNRTRTALMLGISRRALMYKLQEYGI 456