Pairwise Alignments

Query, 593 a.a., Alginate biosynthesis sensor protein KinB from Pseudomonas putida KT2440

Subject, 1196 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  142 bits (358), Expect = 8e-38
 Identities = 122/455 (26%), Positives = 218/455 (47%), Gaps = 42/455 (9%)

Query: 167 LLVSGVLGLMGLVVLVLGFITAHNIARRFGQPIEALAKAADQLGKGNFDVTLPVTQAAEL 226
           +LV  +L   G ++ +  ++    +AR  G     LA +   + +G+F   +P     E+
Sbjct: 321 MLVVAMLTFFGPLLFIWLYLGRSVVARLAG-----LASSMHAIAEGDFQAPIPGQGNDEI 375

Query: 227 NQLTRRFGLMADALRKHQATNVDELLAGQQRLQAVLDSI----------DDGLLIIDRQG 276
             +     +  DA+ K Q ++ + L+  ++RL+ +LD+           D+ +L+++ + 
Sbjct: 376 TDMAAELAVFRDAMAKLQESS-EALIESERRLRRILDTSPLALAISRVSDNAILLVNPRW 434

Query: 277 RLEHLNPVAQRQLG------WNDSRLGSSLVEALQRPELEQQLRQVLR---GGSLDRPPD 327
              +  P   R LG      + D    + LVE +++          +R   G        
Sbjct: 435 SELYRLPKG-RALGMTVASCYADPANRARLVELVRKRGFVSGFECRMRASDGHEFWAMLS 493

Query: 328 DLNMEVDEESRLLTYSLTPVSHPQGPILGAVMVLHDVTEQRAFERVRSEFVLRASHELRT 387
              +E+D E  ++  S     H +     A+     V E+ +  + +S F+   SHE+RT
Sbjct: 494 AAEIEMDGEPAVIASSTDITRHKEEE--AALAEAKKVAEEAS--QAKSLFLATMSHEIRT 549

Query: 388 PVTGMHMAFGLLRERVKFPPEARENDLLETIGEEMQRLTQLINDLLNFSRYQSGLQKLEL 447
           P+ G+ +    L E +  P E RE  +   I +    L  +IND+L+FS+ ++   +LEL
Sbjct: 550 PMNGV-LTMAQLLEDMPLPAEQRE--MARVIRDSATSLLTIINDILDFSKIEADKLQLEL 606

Query: 448 APCAIDDLLDHAQSRFAEQAAHKQIELIKELDPPLP-RIQADVAQLDRVLDNLLHNAIRH 506
              ++ ++++        +A  K I LI  +DP L   +  D  +L +++ NL  NAI+ 
Sbjct: 607 VDLSLSEVVEGVADLLTIRAQEKGISLITFVDPALTDMVVGDPIRLRQIITNLAGNAIKF 666

Query: 507 TANGG-RIRLHA---RRHAERVIISVEDNGEGISYGQQARIFEPFVQ----VGRKKGGAG 558
           T  G  RI + A   R    R+  S+ D G G+   QQAR+FEPF+Q    + R+ GG G
Sbjct: 667 TDKGYVRIAVRALDPRERPLRLEFSITDTGIGLDSEQQARLFEPFMQADITISRRYGGTG 726

Query: 559 LGLALCKEIVQLHGGRMGVFSRPGQGTQFYMALPV 593
           LGL++C+ +V + GG +GV S  GQG+ F+  +P+
Sbjct: 727 LGLSICRRLVAMMGGEIGVRSNVGQGSTFWFQVPL 761