Pairwise Alignments

Query, 262 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase from Pseudomonas putida KT2440

Subject, 207 a.a., N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 84.3 bits (207), Expect = 2e-21
 Identities = 57/126 (45%), Positives = 67/126 (53%), Gaps = 18/126 (14%)

Query: 62  EVSSHYLIG-DGPATVYQLVDENRRAWHAGESQWQGRTWLNSSSIGIEIVNPGFTDTPNG 120
           EVSSH+ +  DG   V Q VD + RAWHAG S W+GR   N  SIGIE+          G
Sbjct: 83  EVSSHFFVRRDGE--VVQFVDADARAWHAGASCWRGRHNCNDDSIGIEL---------EG 131

Query: 121 RVWHPYSEAQVQALIALLKDIVKRNNIEPRHIIGHSDIAPLRKLDPGPLFPWKRL-ADAG 179
                +  AQ  AL  L   +V+R  +  RHI GH  IAP RK DPGP F W RL AD  
Sbjct: 132 LEGERFEAAQYTALARLCTQLVRRYPV--RHIAGHEHIAPGRKQDPGPGFDWSRLQADLQ 189

Query: 180 LGIWPD 185
              WP+
Sbjct: 190 ---WPE 192