Pairwise Alignments

Query, 262 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase from Pseudomonas putida KT2440

Subject, 276 a.a., predicted amidase and lipoprotein (NCBI) from Escherichia coli BW25113

 Score =  189 bits (479), Expect = 7e-53
 Identities = 106/259 (40%), Positives = 152/259 (58%), Gaps = 16/259 (6%)

Query: 15  LSVAGCS--------TGLRIDRSHPSANQDNRIQFVVLHYTNASLERSLALLTHGEVSSH 66
           L +AGC+         G ++D    +     RI+ +V+HYT    + SLA LT  +VSSH
Sbjct: 12  LLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSH 71

Query: 67  YLIG------DGPATVYQLVDENRRAWHAGESQWQGRTWLNSSSIGIEIVNPGFTDTPNG 120
           YL+       +G   ++QLV E   AWHAG S W+G T LN +SIGIE+ N G+  +   
Sbjct: 72  YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV 131

Query: 121 RVWHPYSEAQVQALIALLKDIVKRNNIEPRHIIGHSDIAPLRKLDPGPLFPWKRLADAGL 180
           + + P+  AQ+QALI L KDI+ R +I+P +++ H+DIAP RK DPGPLFPW++LA  G+
Sbjct: 132 KYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGI 191

Query: 181 GIWPDANAVARQQAYFSVNPP-SVGWYQQELARFGYQIEQTGVLDVATRHVVAAFQMRFR 239
           G WPDA  V    A  + + P       + LAR+GY + +  +     R V+ AFQM FR
Sbjct: 192 GAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDV-KPDMTPREQRRVIMAFQMHFR 250

Query: 240 PQRFDGMPDAQTAAMLQVL 258
           P  ++G  DA+T A+ + L
Sbjct: 251 PTLYNGEADAETQAIAEAL 269