Pairwise Alignments

Query, 645 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 345 a.a., GAF domain/GGDEF domain protein from Pseudomonas putida KT2440

 Score =  124 bits (311), Expect = 7e-33
 Identities = 74/168 (44%), Positives = 95/168 (56%)

Query: 475 REHLEEQRQKALLDPLTGLPNRAAWSERVEREMLDWQENGGHLAMAILDLDHFKRINDNY 534
           R  ++  +++ALLDPLT L NR A +    RE+   +E G  L     DLD FK +ND +
Sbjct: 171 RVEMDRGQRRALLDPLTQLWNRGALAAFQNRELRLAEERGLQLGAVYADLDRFKSVNDEH 230

Query: 535 GHLAGDKVLKIVADQLRKRLRGRDFIARFGGEEFVMLLPQTTPAVAAQVAEVLRATVEAC 594
           GH AGDKVL   A +LR  LR  D + R GGEEFV LL        AQ+AE LR ++ + 
Sbjct: 231 GHDAGDKVLCECARRLRATLRPDDLLVRQGGEEFVALLRVKDSQELAQIAERLRQSIGSA 290

Query: 595 PFHFKGERVVITTSIGLGAFRSGERSDQVLKRADAALYRAKELGRNRV 642
           PF   G    +T SIG      GE+ D  +KRAD  LY AK  GR++V
Sbjct: 291 PFLLPGGPRKMTMSIGCALLTQGEQIDDAIKRADGGLYAAKHGGRDQV 338



 Score = 24.6 bits (52), Expect = 0.007
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 31  DLLRRGLVRSTLAAEGSDKVVDECMKEMRDVIRSDNM 67
           DL R   V      +  DKV+ EC + +R  +R D++
Sbjct: 219 DLDRFKSVNDEHGHDAGDKVLCECARRLRATLRPDDL 255