Pairwise Alignments

Query, 210 a.a., probable GTP-binding protein from Pseudomonas putida KT2440

Subject, 462 a.a., GTPase Der from Xanthobacter sp. DMC5

 Score = 44.3 bits (103), Expect = 4e-09
 Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 16/172 (9%)

Query: 32  YEVAFAGRSNAGKSSALNTLTHASLARTSKTPG--RTQLLNFFSLDD-ERRLVDLPGYGY 88
           + +A  GR N GKS+  N L    LA     PG  R +      L D   R+VD  G   
Sbjct: 3   FSLAIVGRPNVGKSTLFNRLVGKKLALVDDRPGVTRDRREGEGRLGDLTFRIVDTAGLEE 62

Query: 89  AKVPIPLKQHWQKHLEAYLGSRECLRGVILMMDVRHPMTDFDKMMLDWAKASSMPMHILL 148
           A  P  L+   +   EA +G  +    ++ M+D R  +T  D+   D  + +  P+ ++ 
Sbjct: 63  A-TPASLEGRMRAQTEAAIGDCD---AILFMIDARIGLTPTDRAFADLVRKAGKPVILVA 118

Query: 149 TKADKLTHGAGKNTLLKVQSEIRKGWGDGVTIQLFSAPKRLGVEDAYRVLAD 200
            K++    G    TL         G GD + +   SA    G+ D Y  + D
Sbjct: 119 NKSE--GRGGEAGTL----EAFGLGLGDPIPL---SAEHGEGLSDLYDAICD 161



 Score = 23.1 bits (48), Expect = 0.009
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 3/47 (6%)

Query: 164 LKVQSEIRKGWGDGVTIQLFSAPKRLGVEDAYRVLADWMELEDKPVV 210
           ++ Q+E   G  D +   LF    R+G+    R  AD +    KPV+
Sbjct: 72  MRAQTEAAIGDCDAI---LFMIDARIGLTPTDRAFADLVRKAGKPVI 115