Pairwise Alignments

Query, 210 a.a., probable GTP-binding protein from Pseudomonas putida KT2440

Subject, 487 a.a., GTPase Der from Pseudomonas putida KT2440

 Score = 41.2 bits (95), Expect = 3e-08
 Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 13/183 (7%)

Query: 20  AAKVEQCPDDQGYEVAFAGRSNAGKSSALNTLTHASLARTSKTPGRTQ--LLNFFSLDDE 77
           A ++    +  G ++A  GR N GKS+ +N +           PG T+  +   F  D E
Sbjct: 181 AVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDEPGTTRDSIYIPFERDGE 240

Query: 78  R-RLVDLPGYGYAKVPIPLKQHWQKHLEAYLGSRECLRG---VILMMDVRHPMTDFDKMM 133
           +   +D  G     V    K H +    + + + + ++    VI +MD R  + D D  +
Sbjct: 241 KYTFIDTAG-----VRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 295

Query: 134 LDWAKASSMPMHILLTKADKLTHGAGKNTLLKVQSEIRKGWGDGVTIQLFSAPKRLGVED 193
           L +A  +   + I L K D +    G+   +K + E R  + D   I   SA    GV +
Sbjct: 296 LGFALEAGRAIVIALNKWDGME--PGERAYVKTELERRLFFVDFADIHFISALHGTGVGN 353

Query: 194 AYR 196
            Y+
Sbjct: 354 LYK 356



 Score = 32.0 bits (71), Expect = 2e-05
 Identities = 31/124 (25%), Positives = 52/124 (41%), Gaps = 8/124 (6%)

Query: 34  VAFAGRSNAGKSSALNTLTHASLARTSKTPGRTQLLNFFSLDDERR---LVDLPGYGYAK 90
           +A  GR N GKS+  N LT    A      G T+   +     + R   L+D  G    +
Sbjct: 5   IALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTGGITGDE 64

Query: 91  VPIPLKQHWQKHLEAYLGSRECLRGVILMMDVRHPMTDFDKMMLDWAKASSMPMHILLTK 150
           V +      +K  E  L + E    V+ ++D R  MT  D+M+ +  +  +    ++  K
Sbjct: 65  VGMD-----EKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKAAILVANK 119

Query: 151 ADKL 154
            D +
Sbjct: 120 IDNI 123