Pairwise Alignments

Query, 256 a.a., methionine ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 271 a.a., methionine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  128 bits (322), Expect = 1e-34
 Identities = 87/246 (35%), Positives = 128/246 (52%), Gaps = 11/246 (4%)

Query: 3   KLLAVAAAV---AAFSAQADTL--TVAATPVPHAEILNFVKPQLAKEGVELKVKEFTDYI 57
           K LA+A  +     F+A+A     T AA  +P    L     +  K+G+++++ EFTD+I
Sbjct: 11  KALALALGLFSSVVFAAEAPLKIGTTAAFAIP----LEAAVAEAGKQGLKVELVEFTDWI 66

Query: 58  QPNVQVAEKRLDANFFQHQPYLDEFNKAKGTSLVSVAGVHIEPLGVYSTKIKKLDELSSG 117
            PNV +A   +D N+FQH P+L+    A G  LV  A   I  +G+YS + K +++L  G
Sbjct: 67  APNVSLAAGDIDVNYFQHIPFLENAKAAAGFDLVPYAPGIINNVGLYSKQYKSINDLPQG 126

Query: 118 ATVVIPNDATNGGRALLLLDKAGVIKLKDNKNILSTVKDVAENPKNVKFRELEAATIPRV 177
           A+V I ND  N GR L LL KAG+I LK      +T +D+  NPK +K  ++EA  + R 
Sbjct: 127 ASVAIANDPINSGRGLQLLAKAGLITLKPGVGYKATEEDIVSNPKKIKILQVEAVQLVRA 186

Query: 178 LTQVDAALINTNYALEAKLNPEKDALAIEGSDSP-YVNILVARPDNK-DSDDMKKLAAAL 235
               D       Y   +K    + AL  +G D P YV   V +P +K D   +K +    
Sbjct: 187 YDDADLVQGYPAYIRLSKTFDAESALLFDGLDHPEYVIQFVIQPKSKTDPRVIKFVDIYQ 246

Query: 236 HSPEVK 241
           HSP V+
Sbjct: 247 HSPAVR 252