Pairwise Alignments

Query, 256 a.a., methionine ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 261 a.a., NLPA lipoprotein from Pseudomonas putida KT2440

 Score =  343 bits (880), Expect = 2e-99
 Identities = 176/261 (67%), Positives = 204/261 (78%), Gaps = 5/261 (1%)

Query: 1   MKKLLAVAAAVAAFS-----AQADTLTVAATPVPHAEILNFVKPQLAKEGVELKVKEFTD 55
           MKK L   A  AA S     A A+ L VAATPVPHAEIL  +KP LAKEGV+L++K FTD
Sbjct: 1   MKKTLLTTALAAALSFSGLAAAAEKLVVAATPVPHAEILELIKPTLAKEGVDLQIKVFTD 60

Query: 56  YIQPNVQVAEKRLDANFFQHQPYLDEFNKAKGTSLVSVAGVHIEPLGVYSTKIKKLDELS 115
           Y+QPNVQV +KRLDAN+FQ  PYL  FN+ KGT L +V GVH+EP G YS K+K L EL 
Sbjct: 61  YVQPNVQVDQKRLDANYFQTLPYLQNFNEGKGTHLETVVGVHVEPFGGYSKKVKALSELK 120

Query: 116 SGATVVIPNDATNGGRALLLLDKAGVIKLKDNKNILSTVKDVAENPKNVKFRELEAATIP 175
            GATV IPN+ +N GRALLLL KAG+I LKD KN L+T KD+AENPK +KFRELE+A +P
Sbjct: 121 EGATVAIPNEGSNSGRALLLLQKAGLITLKDPKNALATPKDIAENPKKLKFRELESAMLP 180

Query: 176 RVLTQVDAALINTNYALEAKLNPEKDALAIEGSDSPYVNILVARPDNKDSDDMKKLAAAL 235
           RVL QVD  +INTNYALEA LNP KDAL IEG+DSPYVN LVARPDNKDS+ ++KLA AL
Sbjct: 181 RVLDQVDLDMINTNYALEAGLNPAKDALVIEGADSPYVNFLVARPDNKDSEAIQKLAKAL 240

Query: 236 HSPEVKQFIIEKYKGAVVPAF 256
            SPEVK FI +KY+GAV+PAF
Sbjct: 241 TSPEVKAFIAKKYQGAVLPAF 261