Pairwise Alignments

Query, 295 a.a., cytochrome c oxidase subunit 3 from Pseudomonas putida KT2440

Subject, 275 a.a., Cytochrome c oxidase subunit 3 from Xanthobacter sp. DMC5

 Score =  232 bits (591), Expect = 8e-66
 Identities = 126/288 (43%), Positives = 166/288 (57%), Gaps = 30/288 (10%)

Query: 7   YYVPAQSKWPIIATIGMFITVFGLGTWFNDMKAGHPDSHGPLIFFVGALFLAYMLFGWFG 66
           Y+V   S WPII ++   I   G   W +   A        LI  VG L + Y +FGW+ 
Sbjct: 11  YHVVDPSPWPIIGSVAALILTSGAVVWMHGGTA--------LIMTVGFLGVLYTMFGWWR 62

Query: 67  AVVKESRAGLYSPQLDRSFRWGMSWFIFSEVMFFLAFFGALFYVRVLAGPWLGGEGAKGV 126
            V++ESRAG ++  +    R+G+  FI SEVMFF+A+F A F   + AG  +  +  +  
Sbjct: 63  DVIRESRAGFHTRVVVLGLRYGVILFIASEVMFFVAWFWAFFDASLFAGEAINFQRME-F 121

Query: 127 THMLWPTFEFTWPLLHTPDPKLFPPPKEVIDPWHLPLINTILLVSSSVTITIAHHALRRD 186
           T  +WP                 P   E +DPWHLPL+NT++L++S  T+T AHHAL   
Sbjct: 122 TGGMWP-----------------PKGIESLDPWHLPLLNTLILLTSGTTVTWAHHALVHG 164

Query: 187 HRGPLKFWMALTIVLGISFIALQAFEYYEAYTKLGLTLGSGIYGATFFMLTGFHGAHVTL 246
            R  LK+ +  T+VLG+ F   QA+EYY A+          IYGATFFM TGFHG HV +
Sbjct: 165 DRQGLKWGLWCTVVLGVLFSMCQAYEYYHAH----FHFAGNIYGATFFMATGFHGFHVIV 220

Query: 247 GTIILIVMFVRILRGHFNPEKHFGFEAASWYWHFVDVVWVGLFIFVYV 294
           GTI L V  +R   G F P+KHFGFEAA+WYWHFVDVVW+ LF F+YV
Sbjct: 221 GTIFLAVCLMRTYMGDFTPQKHFGFEAAAWYWHFVDVVWLFLFTFIYV 268