Pairwise Alignments

Query, 295 a.a., cytochrome c oxidase subunit 3 from Pseudomonas putida KT2440

Subject, 293 a.a., Cytochrome c oxidase polypeptide III (EC 1.9.3.1) from Variovorax sp. SCN45

 Score =  286 bits (731), Expect = 5e-82
 Identities = 140/293 (47%), Positives = 189/293 (64%), Gaps = 13/293 (4%)

Query: 6   HYYVPAQSKWPIIATIGMFITVFGLGTWFNDMKAGHPDSHGPLIFFVGALFLAYMLFGWF 65
           +Y+VP  S +P+ A IG+F  + G   W N    G       ++ ++G LF+      WF
Sbjct: 11  YYFVPGPSAYPVSAAIGLFFVILGAAQWINGHAWGAWSLLAGMVIWLGTLFV------WF 64

Query: 66  GAVVKESRAGLYSPQLDRSFRWGMSWFIFSEVMFFLAFFGALFYVRVLAGPWLGGEGAKG 125
            A + ES +G Y  ++D SFRW MSWFIFSEVMFF AFF AL++ R  A P LG      
Sbjct: 65  RAAIGESESGQYGHKVDLSFRWSMSWFIFSEVMFFGAFFTALWWARTHALPTLGSLD--- 121

Query: 126 VTHMLWPTFEFTWPLLH---TPDPKLFPPPKEVIDPWHLPLINTILLVSSSVTITIAHHA 182
              +LWP F+  WP +    T  P     P + + P+ LP INT LL+SS VT+TIAHHA
Sbjct: 122 -NAILWPDFKAVWPSVAAGATGSPAGIVEPFQTVGPFWLPTINTALLLSSGVTLTIAHHA 180

Query: 183 LRRDHRGPLKFWMALTIVLGISFIALQAFEYYEAYTKLGLTLGSGIYGATFFMLTGFHGA 242
           LR  HR     +M +T++LG+ F+ +QA+EY+  YT+L L L SG YG+TFFMLTGFHG 
Sbjct: 181 LRAGHRAQTIRFMWMTVLLGLIFLGVQAYEYHHLYTELNLKLSSGTYGSTFFMLTGFHGL 240

Query: 243 HVTLGTIILIVMFVRILRGHFNPEKHFGFEAASWYWHFVDVVWVGLFIFVYVL 295
           HV +G ++L+ + +R+ +GHF PE+HFGFE A+WYWHFVDVVW+GL++ VY L
Sbjct: 241 HVFIGMLMLLFITLRLRKGHFTPERHFGFEGAAWYWHFVDVVWLGLYMLVYWL 293