Pairwise Alignments

Query, 295 a.a., cytochrome c oxidase subunit 3 from Pseudomonas putida KT2440

Subject, 276 a.a., Cytochrome c oxidase polypeptide III (EC 1.9.3.1) from Sphingobium sp. HT1-2

 Score =  196 bits (497), Expect = 6e-55
 Identities = 109/298 (36%), Positives = 157/298 (52%), Gaps = 41/298 (13%)

Query: 2   ASHEHYYVPAQSKWPIIATIGMFITVFGLGTWFNDMKAGHPDSH---GPLIFFVGALFLA 58
           A +  Y++   S WP+  ++   +   G   W       HPD+    G  IF +G   + 
Sbjct: 4   AKNHDYHILPPSIWPLFGSMSALVMAMGAIMWM------HPDAMPAGGGWIFLIGVAGVL 57

Query: 59  YMLFGWFGAVVKESRAGLYSPQLDRSFRWGMSWFIFSEVMFFLAFFGALFYVRVLAGPWL 118
           + +F W+  V+ E+ AG ++P +    R+GM  FI SEVMFF+ +F              
Sbjct: 58  FTMFSWWSNVIAEAHAGDHTPVVQLHLRYGMILFIASEVMFFVGWF-------------- 103

Query: 119 GGEGAKGVTHMLWPTFEFT-WPLLHTPDPKLFPPPK-EVIDPWHLPLINTILLVSSSVTI 176
                       W  F+F+ +P    P   +FP    EV++ + LPL+NT++L+ S  T+
Sbjct: 104 ------------WAFFDFSLFPSELAPIEGMFPSKGIEVMNAFELPLLNTLILLCSGTTV 151

Query: 177 TIAHHALRRDHRGPLKFWMALTIVLGISFIALQAFEYYEAYTKLGLTLGSGIYGATFFML 236
           T AHHAL    R  LK  +  T++LG  F  +QA+EY  A        G   Y + F+M 
Sbjct: 152 TWAHHALIHGDREGLKKGLWCTVILGALFSCIQAYEYMHA----PFPFGGSPYSSAFYMA 207

Query: 237 TGFHGAHVTLGTIILIVMFVRILRGHFNPEKHFGFEAASWYWHFVDVVWVGLFIFVYV 294
           TGFHG HV +GTI L+V  +R  +G F P +HFGFEAA+WYWHFVDVVW+ LF  +YV
Sbjct: 208 TGFHGFHVLVGTIFLVVNLIRAYKGDFTPRQHFGFEAAAWYWHFVDVVWLFLFAAIYV 265