Pairwise Alignments

Query, 529 a.a., Cytochrome c oxidase subunit 1 from Pseudomonas putida KT2440

Subject, 672 a.a., cytochrome o ubiquinol oxidase subunit I from Pseudomonas simiae WCS417

 Score =  390 bits (1003), Expect = e-113
 Identities = 203/513 (39%), Positives = 307/513 (59%), Gaps = 15/513 (2%)

Query: 25  WVLTTNHKDIGTMYLWFSFIMFLLGGSFAMVIRAELFQ-----PGLQIVEPAFFNQMTTM 79
           W+ + +HK IG MY+  + +M L G + A+++R +L       PG   + P  ++Q+ T 
Sbjct: 48  WLTSVDHKKIGVMYVIVAMVMLLRGFADAIMMRTQLAMATEGSPGY--LPPEHYDQIFTA 105

Query: 80  HGLIMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVSTLFSPGG 139
           HG+IM+    MP F GL N  +PL IGA D+A P +N+ SFWLL +  ++L++     G 
Sbjct: 106 HGVIMIIFMAMPFFTGLMNLALPLQIGARDVAYPFLNSLSFWLLVSG-VVLINVSLGVGE 164

Query: 140 GPNFGWTFYAPLS-TTYAPA-SVTFFIFAIHLMGISSIMGAINVIATILNLRAPGMTLMK 197
               GW  Y PLS   Y+P   V ++I+A+ L G+ + +  +N +AT+L +RAPGM LM 
Sbjct: 165 FAKTGWVAYPPLSGLQYSPGVGVDYYIWALQLSGLGTTLTGVNFLATVLKMRAPGMKLMD 224

Query: 198 MPLFVWTWLITAFLLIAVMPVLAGVVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGH 257
           MP+F WT      L++A  P+LA  + ++ +D +     F+   GG+P+++ ++FW +GH
Sbjct: 225 MPIFTWTCTWANVLIVASFPILAATMALLSLDRYLDFHIFTNELGGNPMMYVNLFWAWGH 284

Query: 258 PEVYIMILPAFGAVSSIIPAFSRKPLFGYTSMVYATGAIAFLSFIVWAHHMFVVGIPVVG 317
           PEVYI+ILPAFG  S +I  F+ K LFG+ SMVYA+GAI+ L F+VW HH F +G     
Sbjct: 285 PEVYILILPAFGIFSEVISTFTGKRLFGHHSMVYASGAISVLGFMVWLHHFFTMGSGASV 344

Query: 318 ELFFMYATMLIAVPTGVKVFNWVSTMWEGSLTFETPMLFAIAFVILFTIGGFSGLMLAIA 377
             FF  ATMLI++PTGVK+FNW+ T++ G L   + +L+ + F++ F IGG +G++LAI 
Sbjct: 345 NAFFGLATMLISIPTGVKLFNWLFTIYHGRLRMTSQVLWTLGFMVTFAIGGMTGVLLAIP 404

Query: 378 PADFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTGHMYDETLGKLHFWLSFVGM 437
            ADF  H++ FV+AHFH V++ GA+FG  A   ++ PK  G    E  GK  FW    G 
Sbjct: 405 GADFVLHNSLFVIAHFHNVIIGGAVFGYIAGFSFYFPKAFGFKLHEGWGKAAFWFWISGF 464

Query: 438 NMAFFPMHFVGLAGMPRRI-PDYNLQFADFNMVSSIGAFMFG---ATQIFFLFIVIKCIR 493
            +AF P++ +G  GM RR+    N ++  +  V+  GA M     A Q+  L++ ++  +
Sbjct: 465 FVAFMPLYALGFMGMTRRLNATTNPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRK 524

Query: 494 GGAPAPAKPWDGAEGLEWSIPSPAPYHTFQTPP 526
             A     PW+G   LEWS  SP P++ F   P
Sbjct: 525 QNACESGDPWNG-HTLEWSTSSPPPFYNFAVIP 556