Pairwise Alignments

Query, 529 a.a., Cytochrome c oxidase subunit 1 from Pseudomonas putida KT2440

Subject, 480 a.a., cbb3-type cytochrome c oxidase subunit I from Pseudomonas simiae WCS417

 Score = 79.0 bits (193), Expect = 4e-19
 Identities = 97/480 (20%), Positives = 188/480 (39%), Gaps = 62/480 (12%)

Query: 47  LLGGSFAMVIRAELFQPGLQIVEP-AFFNQMTTMHGLIMVFGAVMPAFVGLA----NWMI 101
           +LG    + I ++L  P L    P   F ++  +H  +++F     AF G A    ++ +
Sbjct: 27  ILGMGLGVFIASQLVWPELNFGLPWTTFGRLRPLHTNLVIF-----AFGGCALFATSYYV 81

Query: 102 PLMIGAPDMALPRMNNFSFWLLPAAFLLLVSTLFSPGGGPNFGWTFYAPLSTTYAPASVT 161
                   +    +  F+FW   A  +  + TL         G+T     +    P ++ 
Sbjct: 82  VQRTCQTRLISDSLAAFTFWGWQAVIVGAIVTL-------PLGYTTTKEYAELEWPIAI- 133

Query: 162 FFIFAIHLMGISSIMGAINVIATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAG 221
                  L+ I  +  A+    TI+  +          ++V  W   AF+L+  M     
Sbjct: 134 -------LLAIVWVTYAVVFFGTIVKRKTKH-------IYVGNWFYGAFILVTAM---LH 176

Query: 222 VVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHPEVYIMILPAF-GAVSSIIPAFSR 280
           +V    + +    S+ + AG  D +    + W++GH  V   +   F G +   +P  + 
Sbjct: 177 IVNHASLPVSLFKSYSAYAGATDAM----IQWWYGHNAVGFFLTTGFLGMMYYFVPKQAE 232

Query: 281 KPLFGYTSMVYATGAIAFLSFIVWA--HHMFVVGIPVVGELFFMYATMLIAVPTGVKVFN 338
           +P++ Y   +    A+  ++  +WA  HH+    +P   +   M  ++++  P+   + N
Sbjct: 233 RPIYSYRLSIVHFWAL--ITLYIWAGPHHLHYTALPDWAQSLGMAMSIILLAPSWGGMIN 290

Query: 339 WVSTM---WEGSLTFETPMLFAIAFVILFTIGGFSGLMLAIAPADFQYHDTYFVVAHFHY 395
            + T+   W   L  +  + F +  +  + +  F G M+AI   +   H T + + H H 
Sbjct: 291 GMMTLSGAWH-KLRTDPILRFLVVSLAFYGMSTFEGPMMAIKTVNSLSHYTDWTIGHVHA 349

Query: 396 VLVPGAIFGIFASAYYWLPKWTG--HMYDETLGKLHFWLSFVGMNMAFFPMHFVGLAG-- 451
             +         + Y+ +P+  G   M+   L   HFWL+ +G  +    M   G+    
Sbjct: 350 GALGWVAMISIGAIYHMIPRLFGRVQMHSVALINTHFWLATIGTVLYIASMWVNGITQGL 409

Query: 452 MPRRIPDYNLQFADF----------NMVSSIGAFMFGATQIFFLFIVIKCIRGGAPAPAK 501
           M R I D       F           +V ++G   F A  +F  + V + +R   PA A+
Sbjct: 410 MWRAINDDGTLTYSFVEALQASHPGYIVRALGGAFFAAGMLFMAYNVWRTVRASDPAEAE 469