Pairwise Alignments

Query, 529 a.a., Cytochrome c oxidase subunit 1 from Pseudomonas putida KT2440

Subject, 667 a.a., Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) from Variovorax sp. SCN45

 Score =  421 bits (1081), Expect = e-122
 Identities = 209/513 (40%), Positives = 316/513 (61%), Gaps = 11/513 (2%)

Query: 25  WVLTTNHKDIGTMYLWFSFIMFLLGGSFAMVIRAE---LFQPGLQIVEPAFFNQMTTMHG 81
           W+ + +HK IG MY+    +M L G + A+++RA+    F      + P  ++Q+ T HG
Sbjct: 58  WITSIDHKKIGIMYIILGLVMLLRGFADALMMRAQQAMAFGDNAGFLPPHHYDQVFTAHG 117

Query: 82  LIMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVSTLFSPGGGP 141
           +IM+F   MP   GL N+++PL IGA D+A P +NNFSFW+      L++++LF  G   
Sbjct: 118 VIMIFFVAMPLVTGLMNFVVPLQIGARDVAFPFLNNFSFWMTTFGAGLVMASLFV-GEFA 176

Query: 142 NFGWTFYAPLS-TTYAP-ASVTFFIFAIHLMGISSIMGAINVIATILNLRAPGMTLMKMP 199
             GW  Y PLS   Y+P   V ++I+++ + G+ +++  +N++ATI+ +RAPGMT+MKMP
Sbjct: 177 KTGWLAYPPLSGILYSPDVGVDYYIWSLQIAGVGTLLSGVNLLATIVKMRAPGMTMMKMP 236

Query: 200 LFVWTWLITAFLLIAVMPVLAGVVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHPE 259
           +F WT L T  L++A  PVL  V+ ++ +D + GT+FF+   GG+ +++ ++ W +GHPE
Sbjct: 237 VFTWTALCTNVLIVAAFPVLTAVLALLSLDRYAGTNFFTNDMGGNAMMYVNLIWIWGHPE 296

Query: 260 VYIMILPAFGAVSSIIPAFSRKPLFGYTSMVYATGAIAFLSFIVWAHHMFVVGIPVVGEL 319
           VYI+ILPAFG  S ++  FS K LFGY SMVYAT  I  LS++VW HH F +G       
Sbjct: 297 VYILILPAFGIFSEVVSTFSGKRLFGYASMVYATVVITILSYLVWLHHFFTMGSGASVNS 356

Query: 320 FFMYATMLIAVPTGVKVFNWVSTMWEGSLTFETPMLFAIAFVILFTIGGFSGLMLAIAPA 379
           FF   TM+I++PTG K+FNW+ TM+ G + FE PM++ I F+I F IGG +G++LA+ PA
Sbjct: 357 FFGITTMIISIPTGAKIFNWLFTMYRGRIRFELPMMWTIGFMITFVIGGMTGVLLAVPPA 416

Query: 380 DFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTGHMYDETLGKLHFWLSFVGMNM 439
           DF  H++ F++AHFH V++ G +FG+ A   YW PK  G+  D   GK  FW   VG   
Sbjct: 417 DFVLHNSLFLIAHFHNVIIGGVLFGMLAGITYWFPKAFGYKLDPFWGKCSFWFWIVGFWF 476

Query: 440 AFFPMHFVGLAGMPRRIPDY-NLQFADFNMVSSIGAFMFG-ATQIFFLFIVIKCIRGGA- 496
           AF P++ +GL G+ RR+  + ++    +  V++ GA +       F + +V+  IR  + 
Sbjct: 477 AFMPLYILGLMGVTRRMSHFQDMSLQIWFQVAAFGAVLIALGIASFIIQLVVSFIRRESL 536

Query: 497 -PAPAKPWDGAEGLEWSIPSPAPYHTFQTPPEV 528
                 PW+G   LEWS  SP P + F   P V
Sbjct: 537 RDTTGDPWNG-RTLEWSTSSPPPAYNFAFTPRV 568