Pairwise Alignments

Query, 529 a.a., Cytochrome c oxidase subunit 1 from Pseudomonas putida KT2440

Subject, 666 a.a., Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) from Sphingobium sp. HT1-2

 Score =  416 bits (1070), Expect = e-120
 Identities = 210/514 (40%), Positives = 316/514 (61%), Gaps = 14/514 (2%)

Query: 25  WVLTTNHKDIGTMYLWFSFIMFLLGGSFAMVIRAE---LFQPGLQIVEPAFFNQMTTMHG 81
           W  + +HK IG MY+    +MFL G + A+++R +    F      +    ++Q+ T HG
Sbjct: 58  WFTSVDHKKIGIMYMVLGLVMFLRGFADAVMMRLQQALAFNGSEGYLNAHHYDQVFTAHG 117

Query: 82  LIMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVSTLFSPGGGP 141
           +IM+F   MP   GL N+++PL IGA D++ P +NNFSFW+     +L++++LF  G   
Sbjct: 118 VIMIFFVAMPFITGLMNYIVPLQIGARDVSFPFLNNFSFWMTTGGAVLVMASLFL-GEFA 176

Query: 142 NFGWTFYAPLS-TTYAPAS-VTFFIFAIHLMGISSIMGAINVIATILNLRAPGMTLMKMP 199
             GW  Y PLS   Y+PA+ V ++I+A+ + G+ + +  IN+IATI+ +RAPGM+LMKMP
Sbjct: 177 QTGWLAYPPLSGIDYSPATGVDYYIWALQVAGVGTTLSGINLIATIVKMRAPGMSLMKMP 236

Query: 200 LFVWTWLITAFLLIAVMPVLAGVVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHPE 259
           +F WT L    L++A  P+L   + ++ +D + GT+FF+   GG+P+++ ++ W +GHPE
Sbjct: 237 VFTWTSLCANILIVASFPILTATLVLLSLDRYAGTNFFTNDFGGNPMMYVNLIWIWGHPE 296

Query: 260 VYIMILPAFGAVSSIIPAFSRKPLFGYTSMVYATGAIAFLSFIVWAHHMFVVGIPVVGEL 319
           VYI+ILP FG  S +   FS K LFGYTSMVYAT  I  LS++VW HH F +G       
Sbjct: 297 VYILILPLFGVFSEVTSTFSGKRLFGYTSMVYATCCIMVLSYLVWLHHFFTMGSGASVNS 356

Query: 320 FFMYATMLIAVPTGVKVFNWVSTMWEGSLTFETPMLFAIAFVILFTIGGFSGLMLAIAPA 379
           FF   TM+I++PTG K+FNW+ TM+ G + FE PM++ +AF++ FT+GG +G++LA+ PA
Sbjct: 357 FFGITTMIISIPTGAKLFNWLFTMYRGKIRFELPMMWTVAFMLTFTVGGMTGVLLAVPPA 416

Query: 380 DFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTGHMYDETLGKLHFWLSFVGMNM 439
           DF  H++ F++AHFH V++ G +FG+FA+  YW PK  G   +   GK+ FW   VG  +
Sbjct: 417 DFVLHNSLFLIAHFHNVIIGGVLFGLFAAINYWWPKAFGFKLNVFWGKVSFWCWQVGFWL 476

Query: 440 AFFPMHFVGLAGMPRRI-----PDYNLQFADFNMVSSIGAFMFGATQIFFLFIVIKCIRG 494
           AF P++ +GL G+ RR+     P   + F    + ++I A   GA  + F   + K  R 
Sbjct: 477 AFTPLYIMGLMGVTRRMRVFDDPSLQIYFVIAAIGAAIVAAGIGAMLLQFAISIWK--RD 534

Query: 495 GAPAPAKPWDGAEGLEWSIPSPAPYHTFQTPPEV 528
                  PWDG   LEW+  SP P + F   P V
Sbjct: 535 ELKVEGDPWDG-RTLEWATSSPPPEYNFAFTPVV 567